Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.1■□□□□ 0.33
COL11A1P12107 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.1■□□□□ 0.33
COL11A1P12107 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
COL11A1P12107 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.1■□□□□ 0.33
COL11A1P12107 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
COL11A1P12107 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL11A1P12107 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL11A1P12107 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC17.1■□□□□ 0.33
COL11A1P12107 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
COL11A1P12107 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC17.1■□□□□ 0.33
COL11A1P12107 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC17.1■□□□□ 0.33
COL11A1P12107 AC234782.1-201ENST00000451950 919 ntBASIC17.1■□□□□ 0.33
COL11A1P12107 GCOM2-201ENST00000509133 1104 ntBASIC17.1■□□□□ 0.33
COL11A1P12107 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17.1■□□□□ 0.33
COL11A1P12107 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC17.1■□□□□ 0.33
COL11A1P12107 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.1■□□□□ 0.33
COL11A1P12107 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL11A1P12107 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COL11A1P12107 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL11A1P12107 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL11A1P12107 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.09■□□□□ 0.33
COL11A1P12107 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL11A1P12107 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
COL11A1P12107 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.09■□□□□ 0.33
COL11A1P12107 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL11A1P12107 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COL11A1P12107 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
COL11A1P12107 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.09■□□□□ 0.33
COL11A1P12107 AC013726.1-201ENST00000563747 2285 ntBASIC17.09■□□□□ 0.33
COL11A1P12107 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COL11A1P12107 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
COL11A1P12107 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COL11A1P12107 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL11A1P12107 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC17.09■□□□□ 0.33
COL11A1P12107 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.09■□□□□ 0.33
COL11A1P12107 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COL11A1P12107 FOS-206ENST00000555347 1280 ntTSL 2 BASIC17.09■□□□□ 0.33
COL11A1P12107 VPS18-202ENST00000558474 873 ntTSL 3 BASIC17.09■□□□□ 0.33
COL11A1P12107 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COL11A1P12107 AC008805.1-201ENST00000590892 364 ntBASIC17.09■□□□□ 0.33
COL11A1P12107 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC17.09■□□□□ 0.33
COL11A1P12107 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL11A1P12107 SPCS2P2-201ENST00000603270 608 ntBASIC17.09■□□□□ 0.33
COL11A1P12107 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.09■□□□□ 0.33
COL11A1P12107 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COL11A1P12107 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL11A1P12107 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COL11A1P12107 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL11A1P12107 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL11A1P12107 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL11A1P12107 CYP4F23P-201ENST00000593402 1579 ntBASIC17.09■□□□□ 0.33
COL11A1P12107 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.08■□□□□ 0.33
COL11A1P12107 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
COL11A1P12107 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.08■□□□□ 0.33
COL11A1P12107 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.08■□□□□ 0.33
COL11A1P12107 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
COL11A1P12107 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
COL11A1P12107 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
COL11A1P12107 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
COL11A1P12107 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC17.08■□□□□ 0.33
COL11A1P12107 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC17.08■□□□□ 0.33
COL11A1P12107 AC073150.1-201ENST00000450406 1084 ntBASIC17.08■□□□□ 0.33
COL11A1P12107 AC012618.1-201ENST00000461223 412 ntBASIC17.08■□□□□ 0.33
COL11A1P12107 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.08■□□□□ 0.33
COL11A1P12107 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.08■□□□□ 0.33
COL11A1P12107 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC17.08■□□□□ 0.33
COL11A1P12107 MEG3_2.1-201ENST00000611456 105 ntBASIC17.08■□□□□ 0.33
COL11A1P12107 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC17.08■□□□□ 0.33
COL11A1P12107 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.32
COL11A1P12107 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COL11A1P12107 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
COL11A1P12107 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COL11A1P12107 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COL11A1P12107 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COL11A1P12107 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COL11A1P12107 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COL11A1P12107 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.08■□□□□ 0.32
COL11A1P12107 AC018629.1-201ENST00000623381 1736 ntBASIC17.08■□□□□ 0.32
COL11A1P12107 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COL11A1P12107 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COL11A1P12107 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
COL11A1P12107 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COL11A1P12107 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL11A1P12107 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL11A1P12107 AL645933.1-201ENST00000440087 609 ntBASIC17.07■□□□□ 0.32
COL11A1P12107 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC17.07■□□□□ 0.32
COL11A1P12107 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC17.07■□□□□ 0.32
COL11A1P12107 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.07■□□□□ 0.32
COL11A1P12107 AL161670.2-201ENST00000557650 1227 ntBASIC17.07■□□□□ 0.32
COL11A1P12107 MIR4706-201ENST00000582134 82 ntBASIC17.07■□□□□ 0.32
COL11A1P12107 AC128714.1-201ENST00000637035 887 ntBASIC17.07■□□□□ 0.32
COL11A1P12107 AC004923.1-202ENST00000642106 209 ntBASIC17.07■□□□□ 0.32
COL11A1P12107 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
COL11A1P12107 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
COL11A1P12107 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COL11A1P12107 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL11A1P12107 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.07■□□□□ 0.32
COL11A1P12107 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COL11A1P12107 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL11A1P12107 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms