Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 PTP4A1P2-201ENST00000546033 454 ntBASIC18.09■□□□□ 0.49
TOP1P11387 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.09■□□□□ 0.49
TOP1P11387 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.09■□□□□ 0.49
TOP1P11387 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC18.09■□□□□ 0.49
TOP1P11387 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.09■□□□□ 0.49
TOP1P11387 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.09■□□□□ 0.49
TOP1P11387 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC18.09■□□□□ 0.49
TOP1P11387 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.09■□□□□ 0.49
TOP1P11387 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
TOP1P11387 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TOP1P11387 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TOP1P11387 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TOP1P11387 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TOP1P11387 AC090616.6-203ENST00000579186 1945 ntBASIC18.09■□□□□ 0.49
TOP1P11387 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TOP1P11387 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC18.09■□□□□ 0.49
TOP1P11387 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.09■□□□□ 0.49
TOP1P11387 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.09■□□□□ 0.49
TOP1P11387 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TOP1P11387 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TOP1P11387 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TOP1P11387 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.09■□□□□ 0.49
TOP1P11387 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
TOP1P11387 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TOP1P11387 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
TOP1P11387 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TOP1P11387 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TOP1P11387 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TOP1P11387 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.49
TOP1P11387 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TOP1P11387 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
TOP1P11387 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
TOP1P11387 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TOP1P11387 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TOP1P11387 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TOP1P11387 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TOP1P11387 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
TOP1P11387 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TOP1P11387 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC18.08■□□□□ 0.48
TOP1P11387 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TOP1P11387 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
TOP1P11387 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TOP1P11387 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TOP1P11387 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
TOP1P11387 ACKR1-201ENST00000368121 1240 ntBASIC18.08■□□□□ 0.48
TOP1P11387 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TOP1P11387 AC112492.5-201ENST00000421897 457 ntBASIC18.08■□□□□ 0.48
TOP1P11387 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.08■□□□□ 0.48
TOP1P11387 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.08■□□□□ 0.48
TOP1P11387 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TOP1P11387 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.08■□□□□ 0.48
TOP1P11387 AC068587.3-201ENST00000526613 355 ntBASIC18.08■□□□□ 0.48
TOP1P11387 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TOP1P11387 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.08■□□□□ 0.48
TOP1P11387 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC18.08■□□□□ 0.48
TOP1P11387 AC233724.13-201ENST00000598383 410 ntBASIC18.08■□□□□ 0.48
TOP1P11387 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.08■□□□□ 0.48
TOP1P11387 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TOP1P11387 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
TOP1P11387 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TOP1P11387 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
TOP1P11387 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TOP1P11387 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.08■□□□□ 0.48
TOP1P11387 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TOP1P11387 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
TOP1P11387 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC18.08■□□□□ 0.48
TOP1P11387 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC18.08■□□□□ 0.48
TOP1P11387 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TOP1P11387 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TOP1P11387 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TOP1P11387 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TOP1P11387 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.07■□□□□ 0.48
TOP1P11387 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TOP1P11387 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TOP1P11387 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TOP1P11387 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.07■□□□□ 0.48
TOP1P11387 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TOP1P11387 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TOP1P11387 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TOP1P11387 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.07■□□□□ 0.48
TOP1P11387 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.07■□□□□ 0.48
TOP1P11387 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TOP1P11387 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TOP1P11387 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.07■□□□□ 0.48
TOP1P11387 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TOP1P11387 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.07■□□□□ 0.48
TOP1P11387 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TOP1P11387 RAB43P1-201ENST00000561790 589 ntBASIC18.07■□□□□ 0.48
TOP1P11387 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.07■□□□□ 0.48
TOP1P11387 AL645728.2-202ENST00000641679 227 ntBASIC18.07■□□□□ 0.48
TOP1P11387 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TOP1P11387 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TOP1P11387 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TOP1P11387 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TOP1P11387 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TOP1P11387 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TOP1P11387 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TOP1P11387 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TOP1P11387 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TOP1P11387 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms