Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.96□□□□□ -0.17
FREM3P0C091 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.96□□□□□ -0.17
FREM3P0C091 AL162274.1-201ENST00000617191 1098 ntBASIC13.96□□□□□ -0.17
FREM3P0C091 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FREM3P0C091 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
FREM3P0C091 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
FREM3P0C091 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FREM3P0C091 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FREM3P0C091 AC134312.5-201ENST00000568031 1313 ntBASIC13.96□□□□□ -0.17
FREM3P0C091 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
FREM3P0C091 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.96□□□□□ -0.17
FREM3P0C091 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
FREM3P0C091 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FREM3P0C091 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.96□□□□□ -0.17
FREM3P0C091 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
FREM3P0C091 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FREM3P0C091 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
FREM3P0C091 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
FREM3P0C091 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.96□□□□□ -0.18
FREM3P0C091 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
FREM3P0C091 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.96□□□□□ -0.18
FREM3P0C091 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
FREM3P0C091 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.96□□□□□ -0.18
FREM3P0C091 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.96□□□□□ -0.18
FREM3P0C091 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.96□□□□□ -0.18
FREM3P0C091 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.96□□□□□ -0.18
FREM3P0C091 BCRP2-202ENST00000447763 634 ntBASIC13.96□□□□□ -0.18
FREM3P0C091 AC106760.1-201ENST00000508690 800 ntBASIC13.96□□□□□ -0.18
FREM3P0C091 BCRP6-201ENST00000510112 632 ntBASIC13.96□□□□□ -0.18
FREM3P0C091 BCRP7-201ENST00000511549 544 ntBASIC13.96□□□□□ -0.18
FREM3P0C091 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.96□□□□□ -0.18
FREM3P0C091 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
FREM3P0C091 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.96□□□□□ -0.18
FREM3P0C091 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.96□□□□□ -0.18
FREM3P0C091 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.96□□□□□ -0.18
FREM3P0C091 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
FREM3P0C091 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.96□□□□□ -0.18
FREM3P0C091 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
FREM3P0C091 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
FREM3P0C091 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
FREM3P0C091 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
FREM3P0C091 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
FREM3P0C091 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FREM3P0C091 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FREM3P0C091 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.95□□□□□ -0.18
FREM3P0C091 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.95□□□□□ -0.18
FREM3P0C091 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FREM3P0C091 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.95□□□□□ -0.18
FREM3P0C091 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
FREM3P0C091 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.95□□□□□ -0.18
FREM3P0C091 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.95□□□□□ -0.18
FREM3P0C091 CICP11-201ENST00000434745 2827 ntBASIC13.95□□□□□ -0.18
FREM3P0C091 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FREM3P0C091 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FREM3P0C091 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
FREM3P0C091 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
FREM3P0C091 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FREM3P0C091 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
FREM3P0C091 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
FREM3P0C091 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
FREM3P0C091 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.95□□□□□ -0.18
FREM3P0C091 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
FREM3P0C091 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
FREM3P0C091 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.95□□□□□ -0.18
FREM3P0C091 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.95□□□□□ -0.18
FREM3P0C091 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.95□□□□□ -0.18
FREM3P0C091 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.95□□□□□ -0.18
FREM3P0C091 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
FREM3P0C091 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
FREM3P0C091 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FREM3P0C091 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
FREM3P0C091 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
FREM3P0C091 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FREM3P0C091 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
FREM3P0C091 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
FREM3P0C091 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FREM3P0C091 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
FREM3P0C091 AL158070.2-201ENST00000623713 1621 ntBASIC13.95□□□□□ -0.18
FREM3P0C091 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
FREM3P0C091 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
FREM3P0C091 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
FREM3P0C091 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
FREM3P0C091 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
FREM3P0C091 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.95□□□□□ -0.18
FREM3P0C091 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FREM3P0C091 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FREM3P0C091 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
FREM3P0C091 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
FREM3P0C091 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
FREM3P0C091 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
FREM3P0C091 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
FREM3P0C091 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
FREM3P0C091 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FREM3P0C091 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
FREM3P0C091 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.94□□□□□ -0.18
FREM3P0C091 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FREM3P0C091 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
FREM3P0C091 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.94□□□□□ -0.18
FREM3P0C091 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
FREM3P0C091 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms