Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
ZBED1O96006 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZBED1O96006 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.3■□□□□ 0.2
ZBED1O96006 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ZBED1O96006 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZBED1O96006 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZBED1O96006 DRD5P1-201ENST00000456605 1438 ntBASIC16.3■□□□□ 0.2
ZBED1O96006 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZBED1O96006 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZBED1O96006 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZBED1O96006 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZBED1O96006 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ZBED1O96006 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZBED1O96006 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZBED1O96006 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZBED1O96006 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZBED1O96006 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.3■□□□□ 0.2
ZBED1O96006 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.3■□□□□ 0.2
ZBED1O96006 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.3■□□□□ 0.2
ZBED1O96006 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZBED1O96006 NME2P1-201ENST00000426182 414 ntBASIC16.3■□□□□ 0.2
ZBED1O96006 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.3■□□□□ 0.2
ZBED1O96006 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.3■□□□□ 0.2
ZBED1O96006 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.3■□□□□ 0.2
ZBED1O96006 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.3■□□□□ 0.2
ZBED1O96006 RN7SL752P-201ENST00000463779 287 ntBASIC16.3■□□□□ 0.2
ZBED1O96006 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.3■□□□□ 0.2
ZBED1O96006 AC026410.3-201ENST00000514280 936 ntBASIC16.3■□□□□ 0.2
ZBED1O96006 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.3■□□□□ 0.2
ZBED1O96006 AL359711.2-201ENST00000563105 872 ntBASIC16.3■□□□□ 0.2
ZBED1O96006 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZBED1O96006 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ZBED1O96006 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.3■□□□□ 0.2
ZBED1O96006 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ZBED1O96006 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZBED1O96006 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.3■□□□□ 0.2
ZBED1O96006 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZBED1O96006 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZBED1O96006 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ZBED1O96006 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZBED1O96006 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZBED1O96006 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZBED1O96006 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
ZBED1O96006 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ZBED1O96006 AC006486.2-201ENST00000624246 2199 ntBASIC16.3■□□□□ 0.2
ZBED1O96006 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZBED1O96006 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZBED1O96006 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZBED1O96006 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZBED1O96006 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZBED1O96006 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZBED1O96006 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZBED1O96006 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZBED1O96006 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZBED1O96006 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZBED1O96006 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZBED1O96006 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.29■□□□□ 0.2
ZBED1O96006 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZBED1O96006 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ZBED1O96006 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.29■□□□□ 0.2
ZBED1O96006 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.29■□□□□ 0.2
ZBED1O96006 CU639417.3-201ENST00000624240 1404 ntBASIC16.29■□□□□ 0.2
ZBED1O96006 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.29■□□□□ 0.2
ZBED1O96006 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZBED1O96006 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ZBED1O96006 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZBED1O96006 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZBED1O96006 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZBED1O96006 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZBED1O96006 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZBED1O96006 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZBED1O96006 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.29■□□□□ 0.2
ZBED1O96006 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZBED1O96006 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZBED1O96006 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZBED1O96006 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZBED1O96006 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZBED1O96006 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZBED1O96006 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
ZBED1O96006 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZBED1O96006 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZBED1O96006 RPL5P21-201ENST00000404620 815 ntBASIC16.29■□□□□ 0.2
ZBED1O96006 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZBED1O96006 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZBED1O96006 COX5BP8-201ENST00000416911 349 ntBASIC16.29■□□□□ 0.2
ZBED1O96006 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ZBED1O96006 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.29■□□□□ 0.2
ZBED1O96006 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.29■□□□□ 0.2
ZBED1O96006 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ZBED1O96006 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.29■□□□□ 0.2
ZBED1O96006 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.29■□□□□ 0.2
ZBED1O96006 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.29■□□□□ 0.2
ZBED1O96006 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.29■□□□□ 0.2
ZBED1O96006 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.29■□□□□ 0.2
ZBED1O96006 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.29■□□□□ 0.2
ZBED1O96006 AC120045.2-201ENST00000567334 178 ntBASIC16.29■□□□□ 0.2
ZBED1O96006 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.29■□□□□ 0.2
ZBED1O96006 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.29■□□□□ 0.2
ZBED1O96006 AL033527.5-201ENST00000641382 801 ntBASIC16.29■□□□□ 0.2
ZBED1O96006 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms