Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.09■□□□□ 0.17
BEST1O76090 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.09■□□□□ 0.17
BEST1O76090 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BEST1O76090 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BEST1O76090 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BEST1O76090 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
BEST1O76090 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.09■□□□□ 0.17
BEST1O76090 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BEST1O76090 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BEST1O76090 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BEST1O76090 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
BEST1O76090 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BEST1O76090 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
BEST1O76090 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
BEST1O76090 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.09■□□□□ 0.17
BEST1O76090 AC012508.2-201ENST00000567613 1472 ntBASIC16.09■□□□□ 0.17
BEST1O76090 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
BEST1O76090 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BEST1O76090 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
BEST1O76090 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BEST1O76090 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.09■□□□□ 0.17
BEST1O76090 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
BEST1O76090 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
BEST1O76090 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
BEST1O76090 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
BEST1O76090 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
BEST1O76090 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
BEST1O76090 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
BEST1O76090 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
BEST1O76090 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
BEST1O76090 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BEST1O76090 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BEST1O76090 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.08■□□□□ 0.16
BEST1O76090 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
BEST1O76090 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
BEST1O76090 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.08■□□□□ 0.16
BEST1O76090 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.08■□□□□ 0.16
BEST1O76090 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
BEST1O76090 AC016694.1-201ENST00000434179 700 ntBASIC16.08■□□□□ 0.16
BEST1O76090 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.08■□□□□ 0.16
BEST1O76090 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
BEST1O76090 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
BEST1O76090 CTBP2P5-201ENST00000454986 1264 ntBASIC16.08■□□□□ 0.16
BEST1O76090 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
BEST1O76090 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.08■□□□□ 0.16
BEST1O76090 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.08■□□□□ 0.16
BEST1O76090 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.08■□□□□ 0.16
BEST1O76090 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.08■□□□□ 0.16
BEST1O76090 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.08■□□□□ 0.16
BEST1O76090 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.08■□□□□ 0.16
BEST1O76090 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.08■□□□□ 0.16
BEST1O76090 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.08■□□□□ 0.16
BEST1O76090 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
BEST1O76090 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.08■□□□□ 0.16
BEST1O76090 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
BEST1O76090 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BEST1O76090 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BEST1O76090 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.08■□□□□ 0.16
BEST1O76090 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BEST1O76090 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
BEST1O76090 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
BEST1O76090 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.08■□□□□ 0.16
BEST1O76090 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
BEST1O76090 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.08■□□□□ 0.16
BEST1O76090 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
BEST1O76090 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
BEST1O76090 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
BEST1O76090 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.08■□□□□ 0.16
BEST1O76090 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
BEST1O76090 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
BEST1O76090 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.08■□□□□ 0.16
BEST1O76090 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BEST1O76090 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.08■□□□□ 0.16
BEST1O76090 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
BEST1O76090 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
BEST1O76090 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BEST1O76090 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
BEST1O76090 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
BEST1O76090 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
BEST1O76090 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
BEST1O76090 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BEST1O76090 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BEST1O76090 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
BEST1O76090 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.07■□□□□ 0.16
BEST1O76090 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
BEST1O76090 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BEST1O76090 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
BEST1O76090 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BEST1O76090 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
BEST1O76090 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.07■□□□□ 0.16
BEST1O76090 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.07■□□□□ 0.16
BEST1O76090 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.07■□□□□ 0.16
BEST1O76090 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.07■□□□□ 0.16
BEST1O76090 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.07■□□□□ 0.16
BEST1O76090 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.07■□□□□ 0.16
BEST1O76090 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
BEST1O76090 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
BEST1O76090 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.07■□□□□ 0.16
BEST1O76090 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BEST1O76090 LRRC59-203ENST00000576448 1531 ntBASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms