Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRCH4O75427 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRCH4O75427 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.01■□□□□ 0.15
LRCH4O75427 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.01■□□□□ 0.15
LRCH4O75427 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
LRCH4O75427 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRCH4O75427 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRCH4O75427 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.01■□□□□ 0.15
LRCH4O75427 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRCH4O75427 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.01■□□□□ 0.15
LRCH4O75427 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.01■□□□□ 0.15
LRCH4O75427 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
LRCH4O75427 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.01■□□□□ 0.15
LRCH4O75427 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRCH4O75427 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRCH4O75427 SLC7A15P-201ENST00000424028 1363 ntBASIC16■□□□□ 0.15
LRCH4O75427 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16■□□□□ 0.15
LRCH4O75427 AL157414.3-201ENST00000624276 1954 ntBASIC16■□□□□ 0.15
LRCH4O75427 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRCH4O75427 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRCH4O75427 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16■□□□□ 0.15
LRCH4O75427 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
LRCH4O75427 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRCH4O75427 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
LRCH4O75427 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
LRCH4O75427 OSM-203ENST00000403463 464 ntTSL 3 BASIC16■□□□□ 0.15
LRCH4O75427 AL353779.1-201ENST00000434793 351 ntBASIC16■□□□□ 0.15
LRCH4O75427 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16■□□□□ 0.15
LRCH4O75427 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16■□□□□ 0.15
LRCH4O75427 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16■□□□□ 0.15
LRCH4O75427 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16■□□□□ 0.15
LRCH4O75427 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16■□□□□ 0.15
LRCH4O75427 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRCH4O75427 MIR8072-201ENST00000614241 80 ntBASIC16■□□□□ 0.15
LRCH4O75427 AJ011932.1-201ENST00000621707 465 ntBASIC16■□□□□ 0.15
LRCH4O75427 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16■□□□□ 0.15
LRCH4O75427 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
LRCH4O75427 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRCH4O75427 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRCH4O75427 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRCH4O75427 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16■□□□□ 0.15
LRCH4O75427 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRCH4O75427 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRCH4O75427 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRCH4O75427 CICP14-201ENST00000629111 2732 ntBASIC16■□□□□ 0.15
LRCH4O75427 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRCH4O75427 NORAD-201ENST00000565493 5339 ntBASIC16■□□□□ 0.15
LRCH4O75427 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRCH4O75427 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
LRCH4O75427 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16■□□□□ 0.15
LRCH4O75427 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16■□□□□ 0.15
LRCH4O75427 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.99■□□□□ 0.15
LRCH4O75427 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.99■□□□□ 0.15
LRCH4O75427 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LRCH4O75427 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRCH4O75427 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRCH4O75427 AL360270.3-201ENST00000609118 1348 ntBASIC15.99■□□□□ 0.15
LRCH4O75427 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRCH4O75427 AL138799.1-201ENST00000448213 1675 ntBASIC15.99■□□□□ 0.15
LRCH4O75427 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.99■□□□□ 0.15
LRCH4O75427 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRCH4O75427 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRCH4O75427 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRCH4O75427 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
LRCH4O75427 MIR661-201ENST00000384842 89 ntBASIC15.99■□□□□ 0.15
LRCH4O75427 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.99■□□□□ 0.15
LRCH4O75427 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LRCH4O75427 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.99■□□□□ 0.15
LRCH4O75427 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LRCH4O75427 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.99■□□□□ 0.15
LRCH4O75427 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.99■□□□□ 0.15
LRCH4O75427 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRCH4O75427 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.99■□□□□ 0.15
LRCH4O75427 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.99■□□□□ 0.15
LRCH4O75427 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LRCH4O75427 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.99■□□□□ 0.15
LRCH4O75427 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LRCH4O75427 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRCH4O75427 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRCH4O75427 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRCH4O75427 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRCH4O75427 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRCH4O75427 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
LRCH4O75427 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
LRCH4O75427 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRCH4O75427 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRCH4O75427 AL390755.1-201ENST00000623716 2027 ntBASIC15.99■□□□□ 0.15
LRCH4O75427 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.99■□□□□ 0.15
LRCH4O75427 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRCH4O75427 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.99■□□□□ 0.15
LRCH4O75427 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRCH4O75427 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.98■□□□□ 0.15
LRCH4O75427 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.98■□□□□ 0.15
LRCH4O75427 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRCH4O75427 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRCH4O75427 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRCH4O75427 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRCH4O75427 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.98■□□□□ 0.15
LRCH4O75427 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
LRCH4O75427 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms