Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
PRAMEF2O60811 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PRAMEF2O60811 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PRAMEF2O60811 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PRAMEF2O60811 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PRAMEF2O60811 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PRAMEF2O60811 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PRAMEF2O60811 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PRAMEF2O60811 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PRAMEF2O60811 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PRAMEF2O60811 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
PRAMEF2O60811 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PRAMEF2O60811 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PRAMEF2O60811 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.49□□□□□ -0.09
PRAMEF2O60811 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PRAMEF2O60811 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
PRAMEF2O60811 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PRAMEF2O60811 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
PRAMEF2O60811 AC073347.1-201ENST00000421633 2643 ntBASIC14.49□□□□□ -0.09
PRAMEF2O60811 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
PRAMEF2O60811 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
PRAMEF2O60811 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.49□□□□□ -0.09
PRAMEF2O60811 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.49□□□□□ -0.09
PRAMEF2O60811 C18orf15-201ENST00000623680 2534 ntBASIC14.49□□□□□ -0.09
PRAMEF2O60811 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PRAMEF2O60811 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PRAMEF2O60811 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PRAMEF2O60811 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.49□□□□□ -0.09
PRAMEF2O60811 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PRAMEF2O60811 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PRAMEF2O60811 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PRAMEF2O60811 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.49□□□□□ -0.09
PRAMEF2O60811 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PRAMEF2O60811 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PRAMEF2O60811 HLA-V-201ENST00000429037 534 ntBASIC14.49□□□□□ -0.09
PRAMEF2O60811 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.49□□□□□ -0.09
PRAMEF2O60811 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.49□□□□□ -0.09
PRAMEF2O60811 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.49□□□□□ -0.09
PRAMEF2O60811 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.49□□□□□ -0.09
PRAMEF2O60811 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.49□□□□□ -0.09
PRAMEF2O60811 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.49□□□□□ -0.09
PRAMEF2O60811 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.49□□□□□ -0.09
PRAMEF2O60811 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PRAMEF2O60811 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.49□□□□□ -0.09
PRAMEF2O60811 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PRAMEF2O60811 AC015936.2-201ENST00000593177 259 ntBASIC14.49□□□□□ -0.09
PRAMEF2O60811 AL391069.4-201ENST00000609583 481 ntBASIC14.49□□□□□ -0.09
PRAMEF2O60811 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.49□□□□□ -0.09
PRAMEF2O60811 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.49□□□□□ -0.09
PRAMEF2O60811 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.49□□□□□ -0.09
PRAMEF2O60811 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.49□□□□□ -0.09
PRAMEF2O60811 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PRAMEF2O60811 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
PRAMEF2O60811 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PRAMEF2O60811 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
PRAMEF2O60811 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PRAMEF2O60811 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PRAMEF2O60811 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PRAMEF2O60811 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
PRAMEF2O60811 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PRAMEF2O60811 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PRAMEF2O60811 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PRAMEF2O60811 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.49□□□□□ -0.09
PRAMEF2O60811 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
PRAMEF2O60811 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PRAMEF2O60811 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PRAMEF2O60811 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PRAMEF2O60811 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PRAMEF2O60811 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PRAMEF2O60811 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PRAMEF2O60811 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
PRAMEF2O60811 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PRAMEF2O60811 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
PRAMEF2O60811 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PRAMEF2O60811 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PRAMEF2O60811 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.48□□□□□ -0.09
PRAMEF2O60811 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.48□□□□□ -0.09
PRAMEF2O60811 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PRAMEF2O60811 AC112693.3-201ENST00000624819 1983 ntBASIC14.48□□□□□ -0.09
PRAMEF2O60811 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.48□□□□□ -0.09
PRAMEF2O60811 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
PRAMEF2O60811 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PRAMEF2O60811 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PRAMEF2O60811 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PRAMEF2O60811 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PRAMEF2O60811 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
PRAMEF2O60811 MIR658-201ENST00000385210 100 ntBASIC14.48□□□□□ -0.09
PRAMEF2O60811 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PRAMEF2O60811 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PRAMEF2O60811 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.48□□□□□ -0.09
PRAMEF2O60811 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.48□□□□□ -0.09
PRAMEF2O60811 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.48□□□□□ -0.09
PRAMEF2O60811 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PRAMEF2O60811 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.48□□□□□ -0.09
PRAMEF2O60811 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.48□□□□□ -0.09
PRAMEF2O60811 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PRAMEF2O60811 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.48□□□□□ -0.09
PRAMEF2O60811 AC133539.2-201ENST00000604757 467 ntBASIC14.48□□□□□ -0.09
PRAMEF2O60811 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.48□□□□□ -0.09
PRAMEF2O60811 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms