Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
HOXA2O43364 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.34■□□□□ 0.21
HOXA2O43364 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
HOXA2O43364 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.33■□□□□ 0.21
HOXA2O43364 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
HOXA2O43364 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HOXA2O43364 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
HOXA2O43364 AC026471.1-201ENST00000564629 3026 ntBASIC16.33■□□□□ 0.21
HOXA2O43364 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HOXA2O43364 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
HOXA2O43364 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.33■□□□□ 0.21
HOXA2O43364 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXA2O43364 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXA2O43364 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXA2O43364 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
HOXA2O43364 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXA2O43364 AP003680.1-201ENST00000598970 3660 ntBASIC16.33■□□□□ 0.2
HOXA2O43364 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.33■□□□□ 0.2
HOXA2O43364 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXA2O43364 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.33■□□□□ 0.2
HOXA2O43364 GHSR-202ENST00000427970 912 ntBASIC16.33■□□□□ 0.2
HOXA2O43364 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXA2O43364 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.33■□□□□ 0.2
HOXA2O43364 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXA2O43364 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.33■□□□□ 0.2
HOXA2O43364 AC106794.1-201ENST00000506935 792 ntBASIC16.33■□□□□ 0.2
HOXA2O43364 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC16.33■□□□□ 0.2
HOXA2O43364 AC005740.2-201ENST00000511085 419 ntBASIC16.33■□□□□ 0.2
HOXA2O43364 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HOXA2O43364 AC044849.1-201ENST00000519737 1188 ntBASIC16.33■□□□□ 0.2
HOXA2O43364 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.33■□□□□ 0.2
HOXA2O43364 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC16.33■□□□□ 0.2
HOXA2O43364 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.33■□□□□ 0.2
HOXA2O43364 MIR3619-201ENST00000579667 83 ntBASIC16.33■□□□□ 0.2
HOXA2O43364 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.33■□□□□ 0.2
HOXA2O43364 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXA2O43364 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXA2O43364 FKBP4P6-201ENST00000457486 1332 ntBASIC16.33■□□□□ 0.2
HOXA2O43364 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
HOXA2O43364 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXA2O43364 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HOXA2O43364 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXA2O43364 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.33■□□□□ 0.2
HOXA2O43364 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXA2O43364 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXA2O43364 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXA2O43364 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HOXA2O43364 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
HOXA2O43364 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXA2O43364 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HOXA2O43364 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HOXA2O43364 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXA2O43364 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
HOXA2O43364 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXA2O43364 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HOXA2O43364 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXA2O43364 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HOXA2O43364 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.32■□□□□ 0.2
HOXA2O43364 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.32■□□□□ 0.2
HOXA2O43364 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXA2O43364 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXA2O43364 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.32■□□□□ 0.2
HOXA2O43364 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXA2O43364 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXA2O43364 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HOXA2O43364 AC016700.1-201ENST00000429424 312 ntBASIC16.32■□□□□ 0.2
HOXA2O43364 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.32■□□□□ 0.2
HOXA2O43364 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.32■□□□□ 0.2
HOXA2O43364 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.32■□□□□ 0.2
HOXA2O43364 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HOXA2O43364 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HOXA2O43364 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.32■□□□□ 0.2
HOXA2O43364 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.32■□□□□ 0.2
HOXA2O43364 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.32■□□□□ 0.2
HOXA2O43364 RNA5SP423-201ENST00000517127 109 ntBASIC16.32■□□□□ 0.2
HOXA2O43364 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HOXA2O43364 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
HOXA2O43364 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HOXA2O43364 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXA2O43364 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.32■□□□□ 0.2
HOXA2O43364 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC16.32■□□□□ 0.2
HOXA2O43364 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.32■□□□□ 0.2
HOXA2O43364 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.32■□□□□ 0.2
HOXA2O43364 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HOXA2O43364 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HOXA2O43364 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.32■□□□□ 0.2
HOXA2O43364 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HOXA2O43364 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.32■□□□□ 0.2
HOXA2O43364 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.32■□□□□ 0.2
HOXA2O43364 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.32■□□□□ 0.2
HOXA2O43364 AC138627.1-207ENST00000641560 1006 ntBASIC16.32■□□□□ 0.2
HOXA2O43364 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXA2O43364 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXA2O43364 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HOXA2O43364 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXA2O43364 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXA2O43364 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HOXA2O43364 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXA2O43364 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXA2O43364 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms