Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TLR4O00206 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TLR4O00206 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.26■□□□□ 0.03
TLR4O00206 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TLR4O00206 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TLR4O00206 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TLR4O00206 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TLR4O00206 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TLR4O00206 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TLR4O00206 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.26■□□□□ 0.03
TLR4O00206 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TLR4O00206 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.26■□□□□ 0.03
TLR4O00206 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.26■□□□□ 0.03
TLR4O00206 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TLR4O00206 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
TLR4O00206 AC078819.1-201ENST00000547454 765 ntBASIC15.26■□□□□ 0.03
TLR4O00206 AC012085.1-201ENST00000548270 765 ntBASIC15.26■□□□□ 0.03
TLR4O00206 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.26■□□□□ 0.03
TLR4O00206 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.26■□□□□ 0.03
TLR4O00206 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.26■□□□□ 0.03
TLR4O00206 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.26■□□□□ 0.03
TLR4O00206 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.26■□□□□ 0.03
TLR4O00206 SNX12-206ENST00000622259 661 ntTSL 5 BASIC15.26■□□□□ 0.03
TLR4O00206 AC138951.2-201ENST00000623455 1161 ntBASIC15.26■□□□□ 0.03
TLR4O00206 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.26■□□□□ 0.03
TLR4O00206 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.26■□□□□ 0.03
TLR4O00206 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TLR4O00206 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.26■□□□□ 0.03
TLR4O00206 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TLR4O00206 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
TLR4O00206 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TLR4O00206 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TLR4O00206 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.26■□□□□ 0.03
TLR4O00206 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.26■□□□□ 0.03
TLR4O00206 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TLR4O00206 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TLR4O00206 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TLR4O00206 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TLR4O00206 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TLR4O00206 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TLR4O00206 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TLR4O00206 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TLR4O00206 AL138709.1-201ENST00000614840 1693 ntBASIC15.25■□□□□ 0.03
TLR4O00206 AC010491.1-201ENST00000563101 2797 ntBASIC15.25■□□□□ 0.03
TLR4O00206 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TLR4O00206 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.25■□□□□ 0.03
TLR4O00206 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TLR4O00206 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TLR4O00206 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TLR4O00206 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TLR4O00206 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TLR4O00206 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TLR4O00206 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
TLR4O00206 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.25■□□□□ 0.03
TLR4O00206 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TLR4O00206 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TLR4O00206 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TLR4O00206 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TLR4O00206 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TLR4O00206 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TLR4O00206 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TLR4O00206 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
TLR4O00206 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.25■□□□□ 0.03
TLR4O00206 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.25■□□□□ 0.03
TLR4O00206 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.25■□□□□ 0.03
TLR4O00206 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.25■□□□□ 0.03
TLR4O00206 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.25■□□□□ 0.03
TLR4O00206 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.25■□□□□ 0.03
TLR4O00206 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.25■□□□□ 0.03
TLR4O00206 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.25■□□□□ 0.03
TLR4O00206 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TLR4O00206 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.25■□□□□ 0.03
TLR4O00206 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TLR4O00206 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TLR4O00206 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TLR4O00206 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.25■□□□□ 0.03
TLR4O00206 AC069224.1-201ENST00000566372 1715 ntBASIC15.25■□□□□ 0.03
TLR4O00206 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.25■□□□□ 0.03
TLR4O00206 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.25■□□□□ 0.03
TLR4O00206 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TLR4O00206 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
TLR4O00206 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TLR4O00206 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TLR4O00206 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TLR4O00206 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TLR4O00206 AC068418.2-201ENST00000577309 3703 ntBASIC15.25■□□□□ 0.03
TLR4O00206 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TLR4O00206 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.24■□□□□ 0.03
TLR4O00206 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TLR4O00206 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TLR4O00206 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TLR4O00206 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TLR4O00206 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TLR4O00206 AHCYP2-201ENST00000430630 1300 ntBASIC15.24■□□□□ 0.03
TLR4O00206 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TLR4O00206 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TLR4O00206 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
TLR4O00206 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TLR4O00206 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TLR4O00206 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms