Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 AL139094.1-201ENST00000405549 1188 ntBASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 ECM1P1-201ENST00000604092 1279 ntBASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 AC006453.4-201ENST00000636949 1252 ntBASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 NORAD-201ENST00000565493 5339 ntBASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.3■□□□□ 0.04
TBC1D3FA6NER0 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 AL354989.2-201ENST00000435838 1540 ntBASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 KRT8P44-201ENST00000441609 1350 ntBASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 SAMD11P1-201ENST00000571429 661 ntBASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TBC1D3FA6NER0 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3FA6NER0 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 555.2 ms