Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAV18A0A075B6X5 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 EEF1DP4-201ENST00000446006 880 ntBASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 AL121912.1-201ENST00000603683 238 ntBASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 AP000845.1-201ENST00000581677 2131 ntBASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 BEND3P1-201ENST00000421591 1944 ntBASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV18A0A075B6X5 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
TRAV18A0A075B6X5 TPM1-226ENST00000560959 925 ntTSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms