Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 AL645937.2-201ENST00000396808 931 ntBASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 ACTBP8-201ENST00000403258 1108 ntBASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 AC099336.1-201ENST00000417053 1171 ntBASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 CSF2RBP1-201ENST00000447905 391 ntBASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 FO681548.1-201ENST00000455617 1132 ntBASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 SAMD11P1-201ENST00000571429 661 ntBASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 LARP4-220ENST00000615080 856 ntTSL 5 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 RHOXF1P1-202ENST00000635473 501 ntBASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 AL645728.2-202ENST00000641679 227 ntBASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 AL158070.2-201ENST00000623713 1621 ntBASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC10.54□□□□□ -0.72
LINC00588Q9Y4M8 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 LRRC59-203ENST00000576448 1531 ntBASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 WARS-232ENST00000556645 2508 ntTSL 5 BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 AC067930.6-201ENST00000623257 4947 ntBASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 AC090616.6-203ENST00000579186 1945 ntBASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 AC148477.4-201ENST00000613430 1793 ntBASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 RPS15-201ENST00000233609 534 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 GUK1-206ENST00000366723 845 ntTSL 5 BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 AC079316.1-201ENST00000548397 411 ntBASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 RPS15-205ENST00000586686 562 ntTSL 5 BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 RPS15-208ENST00000591804 711 ntTSL 5 BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 SERF2-217ENST00000630046 862 ntTSL 5 BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 PRSS30P-206ENST00000641773 873 ntBASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC00588Q9Y4M8 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms