Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
DTX4Q9Y2E6 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.27□□□□□ -0.13
DTX4Q9Y2E6 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.27□□□□□ -0.13
DTX4Q9Y2E6 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
DTX4Q9Y2E6 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
DTX4Q9Y2E6 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 AC007787.1-201ENST00000588095 1583 ntBASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 AL157414.3-201ENST00000624276 1954 ntBASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 RN7SL692P-201ENST00000464677 288 ntBASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 AC093813.1-201ENST00000605066 256 ntBASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 AC005252.2-201ENST00000624630 1141 ntBASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.26□□□□□ -0.13
DTX4Q9Y2E6 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 AC004066.1-201ENST00000502488 802 ntBASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 AP001582.1-201ENST00000525856 295 ntBASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DTX4Q9Y2E6 AL596325.1-201ENST00000563991 1082 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms