Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 AC004987.2-201ENST00000395959 1148 ntBASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 AC004967.1-201ENST00000453589 447 ntBASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 AL596442.2-201ENST00000610240 980 ntBASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 AC018529.1-201ENST00000613063 361 ntBASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 AC011477.6-201ENST00000604980 1927 ntBASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
HHLA3Q9XRX5 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 FAM58DP-201ENST00000428076 619 ntBASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 AP006288.1-201ENST00000446065 395 ntBASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 AC023141.5-201ENST00000458585 616 ntBASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 NAA38-207ENST00000576861 556 ntTSL 3 BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 METTL23-205ENST00000588302 925 ntTSL 5 BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 AC003101.2-201ENST00000612557 442 ntBASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 KRT8P44-201ENST00000441609 1350 ntBASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 AC134407.2-201ENST00000625089 1978 ntBASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
HHLA3Q9XRX5 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms