Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PNMA3Q9UL41 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PNMA3Q9UL41 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
PNMA3Q9UL41 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PNMA3Q9UL41 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PNMA3Q9UL41 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PNMA3Q9UL41 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PNMA3Q9UL41 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.64■□□□□ 0.42
PNMA3Q9UL41 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PNMA3Q9UL41 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PNMA3Q9UL41 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
PNMA3Q9UL41 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PNMA3Q9UL41 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PNMA3Q9UL41 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.64■□□□□ 0.41
PNMA3Q9UL41 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PNMA3Q9UL41 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PNMA3Q9UL41 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PNMA3Q9UL41 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PNMA3Q9UL41 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PNMA3Q9UL41 AL136309.1-201ENST00000403917 691 ntBASIC17.64■□□□□ 0.41
PNMA3Q9UL41 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PNMA3Q9UL41 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17.64■□□□□ 0.41
PNMA3Q9UL41 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.64■□□□□ 0.41
PNMA3Q9UL41 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC17.64■□□□□ 0.41
PNMA3Q9UL41 Z97180.1-201ENST00000445173 988 ntBASIC17.64■□□□□ 0.41
PNMA3Q9UL41 MAGEA5-201ENST00000446757 942 ntBASIC17.64■□□□□ 0.41
PNMA3Q9UL41 HIST2H2BB-201ENST00000449108 381 ntBASIC17.64■□□□□ 0.41
PNMA3Q9UL41 SPTLC1P5-201ENST00000450718 252 ntBASIC17.64■□□□□ 0.41
PNMA3Q9UL41 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PNMA3Q9UL41 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.64■□□□□ 0.41
PNMA3Q9UL41 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PNMA3Q9UL41 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
PNMA3Q9UL41 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC17.64■□□□□ 0.41
PNMA3Q9UL41 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC17.64■□□□□ 0.41
PNMA3Q9UL41 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
PNMA3Q9UL41 MTHFR-217ENST00000641820 1569 ntBASIC17.64■□□□□ 0.41
PNMA3Q9UL41 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PNMA3Q9UL41 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.64■□□□□ 0.41
PNMA3Q9UL41 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PNMA3Q9UL41 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
PNMA3Q9UL41 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
PNMA3Q9UL41 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.64■□□□□ 0.41
PNMA3Q9UL41 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PNMA3Q9UL41 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.63■□□□□ 0.41
PNMA3Q9UL41 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PNMA3Q9UL41 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PNMA3Q9UL41 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PNMA3Q9UL41 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
PNMA3Q9UL41 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PNMA3Q9UL41 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
PNMA3Q9UL41 AC084364.1-201ENST00000551967 1556 ntBASIC17.63■□□□□ 0.41
PNMA3Q9UL41 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PNMA3Q9UL41 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PNMA3Q9UL41 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.63■□□□□ 0.41
PNMA3Q9UL41 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PNMA3Q9UL41 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.63■□□□□ 0.41
PNMA3Q9UL41 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC17.63■□□□□ 0.41
PNMA3Q9UL41 IMP3P2-201ENST00000489760 475 ntBASIC17.63■□□□□ 0.41
PNMA3Q9UL41 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PNMA3Q9UL41 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.63■□□□□ 0.41
PNMA3Q9UL41 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PNMA3Q9UL41 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
PNMA3Q9UL41 AC106820.3-201ENST00000561653 397 ntBASIC17.63■□□□□ 0.41
PNMA3Q9UL41 AC097724.1-201ENST00000609581 426 ntBASIC17.63■□□□□ 0.41
PNMA3Q9UL41 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC17.63■□□□□ 0.41
PNMA3Q9UL41 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.63■□□□□ 0.41
PNMA3Q9UL41 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.63■□□□□ 0.41
PNMA3Q9UL41 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
PNMA3Q9UL41 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PNMA3Q9UL41 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PNMA3Q9UL41 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PNMA3Q9UL41 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.63■□□□□ 0.41
PNMA3Q9UL41 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.63■□□□□ 0.41
PNMA3Q9UL41 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PNMA3Q9UL41 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PNMA3Q9UL41 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PNMA3Q9UL41 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PNMA3Q9UL41 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.63■□□□□ 0.41
PNMA3Q9UL41 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PNMA3Q9UL41 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.63■□□□□ 0.41
PNMA3Q9UL41 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.62■□□□□ 0.41
PNMA3Q9UL41 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PNMA3Q9UL41 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.62■□□□□ 0.41
PNMA3Q9UL41 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.62■□□□□ 0.41
PNMA3Q9UL41 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PNMA3Q9UL41 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.62■□□□□ 0.41
PNMA3Q9UL41 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
PNMA3Q9UL41 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PNMA3Q9UL41 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.62■□□□□ 0.41
PNMA3Q9UL41 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PNMA3Q9UL41 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PNMA3Q9UL41 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PNMA3Q9UL41 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PNMA3Q9UL41 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
PNMA3Q9UL41 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PNMA3Q9UL41 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PNMA3Q9UL41 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
PNMA3Q9UL41 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PNMA3Q9UL41 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PNMA3Q9UL41 FXNP2-201ENST00000411625 547 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms