Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
DUX4Q9UBX2 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.67□□□□□ -0.22
DUX4Q9UBX2 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 AC015656.1-201ENST00000624209 3578 ntBASIC13.67□□□□□ -0.22
DUX4Q9UBX2 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 AC142381.1-201ENST00000426099 345 ntBASIC13.67□□□□□ -0.22
DUX4Q9UBX2 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 AP000344.2-201ENST00000512987 629 ntBASIC13.67□□□□□ -0.22
DUX4Q9UBX2 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 AP001160.2-201ENST00000596071 487 ntBASIC13.67□□□□□ -0.22
DUX4Q9UBX2 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 AC004835.2-201ENST00000603762 682 ntBASIC13.67□□□□□ -0.22
DUX4Q9UBX2 GPALPP1-207ENST00000611650 899 ntBASIC13.67□□□□□ -0.22
DUX4Q9UBX2 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.67□□□□□ -0.22
DUX4Q9UBX2 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
DUX4Q9UBX2 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DUX4Q9UBX2 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DUX4Q9UBX2 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
DUX4Q9UBX2 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
DUX4Q9UBX2 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
DUX4Q9UBX2 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.66□□□□□ -0.22
DUX4Q9UBX2 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DUX4Q9UBX2 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
DUX4Q9UBX2 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DUX4Q9UBX2 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.66□□□□□ -0.22
DUX4Q9UBX2 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
DUX4Q9UBX2 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
DUX4Q9UBX2 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DUX4Q9UBX2 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.66□□□□□ -0.22
DUX4Q9UBX2 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DUX4Q9UBX2 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
DUX4Q9UBX2 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
DUX4Q9UBX2 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.66□□□□□ -0.22
DUX4Q9UBX2 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
DUX4Q9UBX2 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.66□□□□□ -0.22
DUX4Q9UBX2 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.66□□□□□ -0.22
DUX4Q9UBX2 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms