Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 AC023908.3-201ENST00000564211 3047 ntBASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
LINC00474Q9P2X8 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 HLA-DRB6-201ENST00000411500 1235 ntBASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 PTK7-212ENST00000476760 902 ntTSL 2 BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 ZNF890P-202ENST00000530367 1156 ntBASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 TIMM17BP1-201ENST00000545713 516 ntBASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 AC112504.1-201ENST00000623415 1841 ntBASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 RER1-203ENST00000378513 3000 ntTSL 3 BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
LINC00474Q9P2X8 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00474Q9P2X8 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
LINC00474Q9P2X8 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00474Q9P2X8 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00474Q9P2X8 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00474Q9P2X8 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00474Q9P2X8 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00474Q9P2X8 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
LINC00474Q9P2X8 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
LINC00474Q9P2X8 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
LINC00474Q9P2X8 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC10.15□□□□□ -0.78
LINC00474Q9P2X8 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00474Q9P2X8 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00474Q9P2X8 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC10.15□□□□□ -0.78
LINC00474Q9P2X8 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC10.15□□□□□ -0.78
LINC00474Q9P2X8 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00474Q9P2X8 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00474Q9P2X8 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC10.15□□□□□ -0.78
LINC00474Q9P2X8 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00474Q9P2X8 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC10.15□□□□□ -0.78
LINC00474Q9P2X8 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
LINC00474Q9P2X8 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC10.15□□□□□ -0.78
LINC00474Q9P2X8 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LINC00474Q9P2X8 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC10.15□□□□□ -0.78
LINC00474Q9P2X8 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
LINC00474Q9P2X8 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms