Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 AC105250.1-201ENST00000509378 2057 ntBASIC17.48■□□□□ 0.39
HOXC10Q9NYD6 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 AP000593.2-201ENST00000542775 1433 ntBASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 AC026434.2-201ENST00000506094 1078 ntBASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 RNA5SP423-201ENST00000517127 109 ntBASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.47■□□□□ 0.39
HOXC10Q9NYD6 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXC10Q9NYD6 AC009090.5-201ENST00000624886 2285 ntBASIC17.46■□□□□ 0.39
HOXC10Q9NYD6 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
HOXC10Q9NYD6 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.46■□□□□ 0.39
HOXC10Q9NYD6 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
HOXC10Q9NYD6 KRT8P29-201ENST00000420409 1371 ntBASIC17.46■□□□□ 0.39
HOXC10Q9NYD6 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXC10Q9NYD6 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.46■□□□□ 0.39
HOXC10Q9NYD6 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.46■□□□□ 0.39
HOXC10Q9NYD6 AC021723.1-201ENST00000486306 515 ntBASIC17.46■□□□□ 0.39
HOXC10Q9NYD6 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXC10Q9NYD6 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXC10Q9NYD6 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXC10Q9NYD6 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXC10Q9NYD6 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXC10Q9NYD6 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXC10Q9NYD6 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
HOXC10Q9NYD6 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.46■□□□□ 0.39
HOXC10Q9NYD6 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXC10Q9NYD6 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXC10Q9NYD6 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXC10Q9NYD6 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.46■□□□□ 0.39
HOXC10Q9NYD6 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.46■□□□□ 0.39
HOXC10Q9NYD6 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXC10Q9NYD6 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.46■□□□□ 0.39
HOXC10Q9NYD6 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
HOXC10Q9NYD6 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 AL513523.2-202ENST00000427283 2040 ntBASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 AP005117.1-202ENST00000581724 1908 ntBASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HOXC10Q9NYD6 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms