Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AC100756.1-201ENST00000562736 682 ntBASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 AC138749.3-201ENST00000567691 622 ntBASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 AC116165.1-201ENST00000611806 668 ntBASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PARPBPQ9NWS1 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 AL589987.1-201ENST00000453380 819 ntBASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 AC138761.1-201ENST00000584393 385 ntBASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 AC000095.1-201ENST00000603208 874 ntBASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 AC093726.1-201ENST00000608064 963 ntBASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 AL158212.4-201ENST00000624062 1286 ntBASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 AC092127.1-201ENST00000567093 3455 ntBASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
PARPBPQ9NWS1 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 MIR661-201ENST00000384842 89 ntBASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 AC105250.1-201ENST00000509378 2057 ntBASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PARPBPQ9NWS1 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms