Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 AC005089.1-201ENST00000619486 2241 ntBASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 PNMT-202ENST00000394246 821 ntTSL 2 BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 FAM8A3P-201ENST00000427218 844 ntBASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 FAM86GP-201ENST00000448322 971 ntBASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 VPS29-207ENST00000549970 818 ntTSL 3 BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 AC007967.4-201ENST00000614700 386 ntBASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 AL035456.1-201ENST00000456064 1369 ntBASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 AC126335.2-201ENST00000623362 4637 ntBASIC12.89□□□□□ -0.35
LIN7CQ9NUP9 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LIN7CQ9NUP9 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
LIN7CQ9NUP9 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LIN7CQ9NUP9 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC12.88□□□□□ -0.35
LIN7CQ9NUP9 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LIN7CQ9NUP9 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
LIN7CQ9NUP9 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LIN7CQ9NUP9 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LIN7CQ9NUP9 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LIN7CQ9NUP9 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
LIN7CQ9NUP9 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LIN7CQ9NUP9 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LIN7CQ9NUP9 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.88□□□□□ -0.35
LIN7CQ9NUP9 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.88□□□□□ -0.35
LIN7CQ9NUP9 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC12.88□□□□□ -0.35
LIN7CQ9NUP9 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LIN7CQ9NUP9 HNRNPUP1-201ENST00000554987 333 ntBASIC12.88□□□□□ -0.35
LIN7CQ9NUP9 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LIN7CQ9NUP9 AC003101.2-201ENST00000612557 442 ntBASIC12.88□□□□□ -0.35
LIN7CQ9NUP9 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC12.88□□□□□ -0.35
LIN7CQ9NUP9 AC093028.1-201ENST00000622998 982 ntBASIC12.88□□□□□ -0.35
LIN7CQ9NUP9 Z92544.3-201ENST00000624747 417 ntBASIC12.88□□□□□ -0.35
LIN7CQ9NUP9 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LIN7CQ9NUP9 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LIN7CQ9NUP9 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LIN7CQ9NUP9 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LIN7CQ9NUP9 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LIN7CQ9NUP9 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LIN7CQ9NUP9 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
LIN7CQ9NUP9 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LIN7CQ9NUP9 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.88□□□□□ -0.35
LIN7CQ9NUP9 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.88□□□□□ -0.35
LIN7CQ9NUP9 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
LIN7CQ9NUP9 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LIN7CQ9NUP9 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 ST20-AS1-201ENST00000560255 4223 ntBASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 LINC00528-201ENST00000600723 2160 ntBASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LIN7CQ9NUP9 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms