Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 AC012508.2-201ENST00000567613 1472 ntBASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 DRD5P1-201ENST00000456605 1438 ntBASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 AC004066.1-201ENST00000502488 802 ntBASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 GAPDHP40-201ENST00000505218 1006 ntBASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 AC023824.1-201ENST00000562945 2975 ntBASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 MIR4745-201ENST00000577608 62 ntBASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 AL132655.2-201ENST00000596276 594 ntBASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 AL161772.1-201ENST00000610494 4412 ntBASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBQLN4Q9NRR5 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 AC091951.1-201ENST00000512854 2465 ntBASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 AC002472.2-201ENST00000442739 958 ntBASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 AC026410.3-201ENST00000514280 936 ntBASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 BRI3BPP1-201ENST00000594224 787 ntBASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UBQLN4Q9NRR5 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms