Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 DDT-204ENST00000404092 805 ntTSL 3 BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 AC092474.2-201ENST00000424288 719 ntBASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 UPK3BP1-201ENST00000428678 509 ntBASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 PRYP6-201ENST00000514804 343 ntBASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 CD63-210ENST00000550776 870 ntTSL 5 BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 AC012640.2-201ENST00000561606 901 ntBASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC10.4□□□□□ -0.75
SND1-IT1Q9HBX3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC10.4□□□□□ -0.75
SND1-IT1Q9HBX3 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC10.4□□□□□ -0.75
SND1-IT1Q9HBX3 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC10.4□□□□□ -0.75
SND1-IT1Q9HBX3 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.75
SND1-IT1Q9HBX3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
SND1-IT1Q9HBX3 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
SND1-IT1Q9HBX3 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.75
SND1-IT1Q9HBX3 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
SND1-IT1Q9HBX3 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
SND1-IT1Q9HBX3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 ZBTB45P2-201ENST00000452245 1531 ntBASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 AC027601.5-201ENST00000624065 2482 ntBASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 AF186996.4-201ENST00000467186 377 ntBASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 AC108751.1-201ENST00000490852 363 ntBASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 CD7-202ENST00000578509 925 ntTSL 3 BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 TBCB-205ENST00000585746 875 ntTSL 3 BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms