Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SH2D4AQ9H788 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SH2D4AQ9H788 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SH2D4AQ9H788 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.91■□□□□ 0.46
SH2D4AQ9H788 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.91■□□□□ 0.46
SH2D4AQ9H788 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.91■□□□□ 0.46
SH2D4AQ9H788 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.91■□□□□ 0.46
SH2D4AQ9H788 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.91■□□□□ 0.46
SH2D4AQ9H788 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
SH2D4AQ9H788 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.91■□□□□ 0.46
SH2D4AQ9H788 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SH2D4AQ9H788 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.91■□□□□ 0.46
SH2D4AQ9H788 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.91■□□□□ 0.46
SH2D4AQ9H788 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.91■□□□□ 0.46
SH2D4AQ9H788 AL603764.1-201ENST00000636452 321 ntBASIC17.91■□□□□ 0.46
SH2D4AQ9H788 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SH2D4AQ9H788 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SH2D4AQ9H788 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SH2D4AQ9H788 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SH2D4AQ9H788 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
SH2D4AQ9H788 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SH2D4AQ9H788 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SH2D4AQ9H788 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SH2D4AQ9H788 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SH2D4AQ9H788 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SH2D4AQ9H788 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SH2D4AQ9H788 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SH2D4AQ9H788 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SH2D4AQ9H788 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SH2D4AQ9H788 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 AC010491.1-201ENST00000563101 2797 ntBASIC17.9■□□□□ 0.46
SH2D4AQ9H788 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 Z93015.1-201ENST00000451718 390 ntBASIC17.9■□□□□ 0.46
SH2D4AQ9H788 AL590640.2-201ENST00000457038 527 ntBASIC17.9■□□□□ 0.46
SH2D4AQ9H788 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 AC103702.1-201ENST00000548801 2630 ntBASIC17.9■□□□□ 0.46
SH2D4AQ9H788 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SH2D4AQ9H788 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SH2D4AQ9H788 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
SH2D4AQ9H788 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.89■□□□□ 0.46
SH2D4AQ9H788 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.89■□□□□ 0.46
SH2D4AQ9H788 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SH2D4AQ9H788 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.89■□□□□ 0.45
SH2D4AQ9H788 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SH2D4AQ9H788 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SH2D4AQ9H788 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.89■□□□□ 0.45
SH2D4AQ9H788 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.89■□□□□ 0.45
SH2D4AQ9H788 AP003680.1-201ENST00000598970 3660 ntBASIC17.89■□□□□ 0.45
SH2D4AQ9H788 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SH2D4AQ9H788 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SH2D4AQ9H788 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SH2D4AQ9H788 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SH2D4AQ9H788 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SH2D4AQ9H788 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.89■□□□□ 0.45
SH2D4AQ9H788 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.89■□□□□ 0.45
SH2D4AQ9H788 MIR1202-201ENST00000408529 83 ntBASIC17.89■□□□□ 0.45
SH2D4AQ9H788 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.89■□□□□ 0.45
SH2D4AQ9H788 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SH2D4AQ9H788 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms