Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 GPS2P2-201ENST00000430745 888 ntBASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 RBPMS2P1-201ENST00000437762 623 ntBASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 TARDBPP1-201ENST00000442013 1203 ntBASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 SPDYE14P-201ENST00000442619 822 ntBASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 SLED1-202ENST00000512051 380 ntBASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 AC139749.1-202ENST00000617529 3139 ntBASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J3Q9H1A7 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 AL133267.1-201ENST00000398220 340 ntBASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 AC026150.2-201ENST00000564693 1156 ntBASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 AC015910.1-201ENST00000579400 975 ntBASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 MIR4469-201ENST00000583919 79 ntBASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
POLR2J3Q9H1A7 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 Z97205.2-201ENST00000564697 1639 ntBASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 AL079307.3-201ENST00000556114 283 ntBASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 AC093520.2-201ENST00000561830 333 ntBASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
POLR2J3Q9H1A7 MIR3687-2-201ENST00000577708 61 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms