Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 GPS2P2-201ENST00000430745 888 ntBASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 RBPMS2P1-201ENST00000437762 623 ntBASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 TARDBPP1-201ENST00000442013 1203 ntBASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 SPDYE14P-201ENST00000442619 822 ntBASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 SLED1-202ENST00000512051 380 ntBASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
POLR2J2Q9GZM3 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 AL133267.1-201ENST00000398220 340 ntBASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 AC026150.2-201ENST00000564693 1156 ntBASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 AC015910.1-201ENST00000579400 975 ntBASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 MIR4469-201ENST00000583919 79 ntBASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
POLR2J2Q9GZM3 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms