Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH11XQ9BZA7 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDH11XQ9BZA7 SLC9A7P1-202ENST00000556476 2239 ntBASIC19.68■□□□□ 0.74
PCDH11XQ9BZA7 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH11XQ9BZA7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH11XQ9BZA7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH11XQ9BZA7 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH11XQ9BZA7 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH11XQ9BZA7 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PCDH11XQ9BZA7 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH11XQ9BZA7 RN7SKP230-201ENST00000365642 335 ntBASIC19.68■□□□□ 0.74
PCDH11XQ9BZA7 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH11XQ9BZA7 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH11XQ9BZA7 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PCDH11XQ9BZA7 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDH11XQ9BZA7 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC19.68■□□□□ 0.74
PCDH11XQ9BZA7 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC19.68■□□□□ 0.74
PCDH11XQ9BZA7 AL353637.1-201ENST00000451571 732 ntBASIC19.68■□□□□ 0.74
PCDH11XQ9BZA7 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDH11XQ9BZA7 RCC2P8-201ENST00000502779 1035 ntBASIC19.68■□□□□ 0.74
PCDH11XQ9BZA7 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDH11XQ9BZA7 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDH11XQ9BZA7 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC19.68■□□□□ 0.74
PCDH11XQ9BZA7 AC018635.2-201ENST00000608625 364 ntBASIC19.68■□□□□ 0.74
PCDH11XQ9BZA7 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH11XQ9BZA7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH11XQ9BZA7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDH11XQ9BZA7 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDH11XQ9BZA7 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH11XQ9BZA7 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH11XQ9BZA7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDH11XQ9BZA7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDH11XQ9BZA7 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH11XQ9BZA7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PCDH11XQ9BZA7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PCDH11XQ9BZA7 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDH11XQ9BZA7 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDH11XQ9BZA7 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH11XQ9BZA7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH11XQ9BZA7 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH11XQ9BZA7 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH11XQ9BZA7 OR6D1P-203ENST00000641209 4860 ntBASIC19.67■□□□□ 0.74
PCDH11XQ9BZA7 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH11XQ9BZA7 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDH11XQ9BZA7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH11XQ9BZA7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PCDH11XQ9BZA7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDH11XQ9BZA7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
PCDH11XQ9BZA7 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
PCDH11XQ9BZA7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PCDH11XQ9BZA7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH11XQ9BZA7 STK33-217ENST00000534493 1895 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDH11XQ9BZA7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PCDH11XQ9BZA7 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH11XQ9BZA7 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH11XQ9BZA7 RN7SKP214-201ENST00000364208 315 ntBASIC19.67■□□□□ 0.74
PCDH11XQ9BZA7 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH11XQ9BZA7 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH11XQ9BZA7 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC19.67■□□□□ 0.74
PCDH11XQ9BZA7 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDH11XQ9BZA7 AC009779.1-201ENST00000551138 283 ntBASIC19.67■□□□□ 0.74
PCDH11XQ9BZA7 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC19.67■□□□□ 0.74
PCDH11XQ9BZA7 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
PCDH11XQ9BZA7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH11XQ9BZA7 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH11XQ9BZA7 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH11XQ9BZA7 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDH11XQ9BZA7 AC006480.2-201ENST00000609770 1337 ntBASIC19.67■□□□□ 0.74
PCDH11XQ9BZA7 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PCDH11XQ9BZA7 CICP11-201ENST00000434745 2827 ntBASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 AC020910.5-201ENST00000623668 1865 ntBASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 VDAC1P1-201ENST00000439229 848 ntBASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 HLA-J-204ENST00000495278 958 ntBASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 AC090857.1-201ENST00000527400 390 ntBASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 RPS15-202ENST00000585665 467 ntTSL 3 BASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms