Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 TEX30-203ENST00000376022 828 ntTSL 2 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 BRF1-202ENST00000379932 884 ntTSL 5 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 TPO-206ENST00000382269 1155 ntTSL 5 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 AL133267.1-201ENST00000398220 340 ntBASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 KATNBL1P2-201ENST00000433311 835 ntBASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 EIF3FP3-201ENST00000434851 1086 ntBASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 FO681548.1-201ENST00000455617 1132 ntBASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 AC022137.2-201ENST00000503482 481 ntBASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 AP003171.2-201ENST00000528208 925 ntBASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 ENPP7P5-201ENST00000541031 1031 ntBASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 C2orf69P2-201ENST00000562032 1123 ntBASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 AP006547.1-201ENST00000563435 692 ntBASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 AC025279.2-201ENST00000569730 653 ntBASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 ETV2-208ENST00000621247 941 ntTSL 5 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 SNX12-206ENST00000622259 661 ntTSL 5 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 AC138951.2-201ENST00000623455 1161 ntBASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 DKFZP434H168-201ENST00000567381 1905 ntBASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-3Q9BYR4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms