Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTFDC1Q9BY42 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RTFDC1Q9BY42 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC18.45■□□□□ 0.54
RTFDC1Q9BY42 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC18.45■□□□□ 0.54
RTFDC1Q9BY42 PDIA3P2-201ENST00000428073 158 ntBASIC18.45■□□□□ 0.54
RTFDC1Q9BY42 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC18.45■□□□□ 0.54
RTFDC1Q9BY42 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RTFDC1Q9BY42 MBP-227ENST00000526111 581 ntTSL 4 BASIC18.45■□□□□ 0.54
RTFDC1Q9BY42 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RTFDC1Q9BY42 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
RTFDC1Q9BY42 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC18.45■□□□□ 0.54
RTFDC1Q9BY42 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTFDC1Q9BY42 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC18.45■□□□□ 0.54
RTFDC1Q9BY42 AC100827.2-201ENST00000563214 1194 ntBASIC18.45■□□□□ 0.54
RTFDC1Q9BY42 DUX4L46-201ENST00000566845 751 ntBASIC18.45■□□□□ 0.54
RTFDC1Q9BY42 AL132994.2-201ENST00000603120 687 ntBASIC18.45■□□□□ 0.54
RTFDC1Q9BY42 AC138696.2-201ENST00000607376 223 ntBASIC18.45■□□□□ 0.54
RTFDC1Q9BY42 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC18.45■□□□□ 0.54
RTFDC1Q9BY42 AL136295.7-201ENST00000619226 1200 ntBASIC18.45■□□□□ 0.54
RTFDC1Q9BY42 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
RTFDC1Q9BY42 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RTFDC1Q9BY42 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RTFDC1Q9BY42 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTFDC1Q9BY42 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18.45■□□□□ 0.54
RTFDC1Q9BY42 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.45■□□□□ 0.54
RTFDC1Q9BY42 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
RTFDC1Q9BY42 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTFDC1Q9BY42 CICP13-201ENST00000422015 2789 ntBASIC18.45■□□□□ 0.54
RTFDC1Q9BY42 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RTFDC1Q9BY42 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTFDC1Q9BY42 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.45■□□□□ 0.54
RTFDC1Q9BY42 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RTFDC1Q9BY42 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RTFDC1Q9BY42 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 AC099398.1-201ENST00000567919 2776 ntBASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 SHC1P1-201ENST00000425230 1745 ntBASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 AL353637.1-201ENST00000451571 732 ntBASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 CEP164P1-201ENST00000455142 418 ntBASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 AC006453.1-201ENST00000636037 1257 ntBASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 AC002472.3-201ENST00000640124 621 ntBASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RTFDC1Q9BY42 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTFDC1Q9BY42 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTFDC1Q9BY42 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTFDC1Q9BY42 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
RTFDC1Q9BY42 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RTFDC1Q9BY42 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTFDC1Q9BY42 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTFDC1Q9BY42 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTFDC1Q9BY42 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTFDC1Q9BY42 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTFDC1Q9BY42 RN7SKP214-201ENST00000364208 315 ntBASIC18.43■□□□□ 0.54
RTFDC1Q9BY42 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RTFDC1Q9BY42 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RTFDC1Q9BY42 ISCA2P1-201ENST00000425548 448 ntBASIC18.43■□□□□ 0.54
RTFDC1Q9BY42 FAM58BP-201ENST00000439056 645 ntBASIC18.43■□□□□ 0.54
RTFDC1Q9BY42 RPL18P13-201ENST00000478088 569 ntBASIC18.43■□□□□ 0.54
RTFDC1Q9BY42 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
RTFDC1Q9BY42 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC18.43■□□□□ 0.54
RTFDC1Q9BY42 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RTFDC1Q9BY42 MIR3147-201ENST00000577811 66 ntBASIC18.43■□□□□ 0.54
RTFDC1Q9BY42 RN7SL555P-201ENST00000584742 339 ntBASIC18.43■□□□□ 0.54
RTFDC1Q9BY42 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTFDC1Q9BY42 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTFDC1Q9BY42 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RTFDC1Q9BY42 ZBTB45P1-201ENST00000452761 1456 ntBASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms