Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 AC055876.3-201ENST00000431496 288 ntBASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 AC138649.4-201ENST00000612222 287 ntBASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 AC041040.2-201ENST00000622926 2899 ntBASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RSPO3Q9BXY4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 METTL21AP1-201ENST00000438852 635 ntBASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 BTBD7P1-201ENST00000447253 1453 ntBASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 AC005840.4-201ENST00000541242 2494 ntBASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RSPO3Q9BXY4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
RSPO3Q9BXY4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.08□□□□□ -0.15
RSPO3Q9BXY4 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
RSPO3Q9BXY4 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
RSPO3Q9BXY4 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RSPO3Q9BXY4 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RSPO3Q9BXY4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RSPO3Q9BXY4 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.08□□□□□ -0.16
RSPO3Q9BXY4 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RSPO3Q9BXY4 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RSPO3Q9BXY4 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RSPO3Q9BXY4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms