Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 BTBD7P1-201ENST00000447253 1453 ntBASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 AGAP7P-201ENST00000582299 2062 ntBASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 AGAP14-201ENST00000624701 2060 ntBASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 RN7SL692P-201ENST00000464677 288 ntBASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 AL596325.1-201ENST00000563991 1082 ntBASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 AC061975.2-201ENST00000581722 295 ntBASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.88□□□□□ -0.19
TRAF4Q9BUZ4 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 AJ011931.1-201ENST00000618749 2492 ntBASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 SERBP1P3-201ENST00000459980 809 ntBASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 AC135586.1-201ENST00000539323 574 ntBASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 AL132655.2-201ENST00000596276 594 ntBASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 AC091951.1-201ENST00000512854 2465 ntBASIC13.87□□□□□ -0.19
TRAF4Q9BUZ4 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms