Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 GRK6P1-201ENST00000400595 1711 ntBASIC11.91□□□□□ -0.5
SHANK2-AS3Q9BTD1 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SHANK2-AS3Q9BTD1 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
SHANK2-AS3Q9BTD1 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SHANK2-AS3Q9BTD1 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC11.91□□□□□ -0.5
SHANK2-AS3Q9BTD1 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SHANK2-AS3Q9BTD1 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SHANK2-AS3Q9BTD1 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
SHANK2-AS3Q9BTD1 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC11.91□□□□□ -0.5
SHANK2-AS3Q9BTD1 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
SHANK2-AS3Q9BTD1 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SHANK2-AS3Q9BTD1 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SHANK2-AS3Q9BTD1 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SHANK2-AS3Q9BTD1 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
SHANK2-AS3Q9BTD1 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SHANK2-AS3Q9BTD1 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 Z97205.2-201ENST00000564697 1639 ntBASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 DEK-201ENST00000244776 1441 ntTSL 2 BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 RPP21-221ENST00000428040 594 ntTSL 2 BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 USP35-204ENST00000530267 2419 ntTSL 2 BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC11.9□□□□□ -0.5
SHANK2-AS3Q9BTD1 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
SHANK2-AS3Q9BTD1 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC11.9□□□□□ -0.51
SHANK2-AS3Q9BTD1 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
SHANK2-AS3Q9BTD1 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
SHANK2-AS3Q9BTD1 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SHANK2-AS3Q9BTD1 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC11.89□□□□□ -0.51
SHANK2-AS3Q9BTD1 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SHANK2-AS3Q9BTD1 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SHANK2-AS3Q9BTD1 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
SHANK2-AS3Q9BTD1 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SHANK2-AS3Q9BTD1 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SHANK2-AS3Q9BTD1 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
SHANK2-AS3Q9BTD1 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
SHANK2-AS3Q9BTD1 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC11.89□□□□□ -0.51
SHANK2-AS3Q9BTD1 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC11.89□□□□□ -0.51
SHANK2-AS3Q9BTD1 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC11.89□□□□□ -0.51
SHANK2-AS3Q9BTD1 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SHANK2-AS3Q9BTD1 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC11.89□□□□□ -0.51
SHANK2-AS3Q9BTD1 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SHANK2-AS3Q9BTD1 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SHANK2-AS3Q9BTD1 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SHANK2-AS3Q9BTD1 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SHANK2-AS3Q9BTD1 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC11.89□□□□□ -0.51
SHANK2-AS3Q9BTD1 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC11.89□□□□□ -0.51
SHANK2-AS3Q9BTD1 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SHANK2-AS3Q9BTD1 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SHANK2-AS3Q9BTD1 FABP5-202ENST00000396359 986 ntTSL 5 BASIC11.89□□□□□ -0.51
SHANK2-AS3Q9BTD1 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC11.89□□□□□ -0.51
SHANK2-AS3Q9BTD1 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC11.89□□□□□ -0.51
SHANK2-AS3Q9BTD1 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC11.89□□□□□ -0.51
SHANK2-AS3Q9BTD1 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC11.89□□□□□ -0.51
SHANK2-AS3Q9BTD1 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC11.89□□□□□ -0.51
SHANK2-AS3Q9BTD1 YBX1P5-201ENST00000509441 847 ntBASIC11.89□□□□□ -0.51
SHANK2-AS3Q9BTD1 AP000344.2-201ENST00000512987 629 ntBASIC11.89□□□□□ -0.51
SHANK2-AS3Q9BTD1 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC11.89□□□□□ -0.51
SHANK2-AS3Q9BTD1 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC11.89□□□□□ -0.51
SHANK2-AS3Q9BTD1 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC11.89□□□□□ -0.51
SHANK2-AS3Q9BTD1 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC11.89□□□□□ -0.51
SHANK2-AS3Q9BTD1 TBCB-211ENST00000589996 724 ntTSL 3 BASIC11.89□□□□□ -0.51
SHANK2-AS3Q9BTD1 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms