Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
BBS4Q96RK4 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BBS4Q96RK4 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.68□□□□□ -0.06
BBS4Q96RK4 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BBS4Q96RK4 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BBS4Q96RK4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.68□□□□□ -0.06
BBS4Q96RK4 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
BBS4Q96RK4 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
BBS4Q96RK4 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BBS4Q96RK4 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BBS4Q96RK4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BBS4Q96RK4 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
BBS4Q96RK4 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BBS4Q96RK4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BBS4Q96RK4 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
BBS4Q96RK4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BBS4Q96RK4 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.67□□□□□ -0.06
BBS4Q96RK4 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BBS4Q96RK4 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BBS4Q96RK4 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BBS4Q96RK4 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
BBS4Q96RK4 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BBS4Q96RK4 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.67□□□□□ -0.06
BBS4Q96RK4 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BBS4Q96RK4 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
BBS4Q96RK4 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
BBS4Q96RK4 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.67□□□□□ -0.06
BBS4Q96RK4 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.67□□□□□ -0.06
BBS4Q96RK4 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BBS4Q96RK4 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.67□□□□□ -0.06
BBS4Q96RK4 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.67□□□□□ -0.06
BBS4Q96RK4 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BBS4Q96RK4 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.67□□□□□ -0.06
BBS4Q96RK4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
BBS4Q96RK4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BBS4Q96RK4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BBS4Q96RK4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.67□□□□□ -0.06
BBS4Q96RK4 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.67□□□□□ -0.06
BBS4Q96RK4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.67□□□□□ -0.06
BBS4Q96RK4 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BBS4Q96RK4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.67□□□□□ -0.06
BBS4Q96RK4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.67□□□□□ -0.06
BBS4Q96RK4 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.67□□□□□ -0.06
BBS4Q96RK4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.67□□□□□ -0.06
BBS4Q96RK4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.67□□□□□ -0.06
BBS4Q96RK4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.67□□□□□ -0.06
BBS4Q96RK4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.67□□□□□ -0.06
BBS4Q96RK4 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.67□□□□□ -0.06
BBS4Q96RK4 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.67□□□□□ -0.06
BBS4Q96RK4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
BBS4Q96RK4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.67□□□□□ -0.06
BBS4Q96RK4 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BBS4Q96RK4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BBS4Q96RK4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BBS4Q96RK4 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.67□□□□□ -0.06
BBS4Q96RK4 AC138969.3-201ENST00000546612 1459 ntBASIC14.67□□□□□ -0.06
BBS4Q96RK4 AC138932.2-201ENST00000548268 1459 ntBASIC14.67□□□□□ -0.06
BBS4Q96RK4 AC126755.4-201ENST00000549796 1459 ntBASIC14.67□□□□□ -0.06
BBS4Q96RK4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.67□□□□□ -0.06
BBS4Q96RK4 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
BBS4Q96RK4 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
BBS4Q96RK4 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
BBS4Q96RK4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.67□□□□□ -0.06
BBS4Q96RK4 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BBS4Q96RK4 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BBS4Q96RK4 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BBS4Q96RK4 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BBS4Q96RK4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BBS4Q96RK4 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
BBS4Q96RK4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.66□□□□□ -0.06
BBS4Q96RK4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BBS4Q96RK4 AL121723.1-201ENST00000445194 1519 ntBASIC14.66□□□□□ -0.06
BBS4Q96RK4 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
BBS4Q96RK4 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.66□□□□□ -0.06
BBS4Q96RK4 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
BBS4Q96RK4 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.66□□□□□ -0.06
BBS4Q96RK4 CICP11-201ENST00000434745 2827 ntBASIC14.66□□□□□ -0.06
BBS4Q96RK4 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.66□□□□□ -0.06
BBS4Q96RK4 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.66□□□□□ -0.06
BBS4Q96RK4 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
BBS4Q96RK4 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
BBS4Q96RK4 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
BBS4Q96RK4 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
BBS4Q96RK4 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
BBS4Q96RK4 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
BBS4Q96RK4 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
BBS4Q96RK4 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BBS4Q96RK4 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
BBS4Q96RK4 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.66□□□□□ -0.06
BBS4Q96RK4 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BBS4Q96RK4 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
BBS4Q96RK4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
BBS4Q96RK4 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.66□□□□□ -0.06
BBS4Q96RK4 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BBS4Q96RK4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
BBS4Q96RK4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BBS4Q96RK4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
BBS4Q96RK4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.66□□□□□ -0.06
BBS4Q96RK4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.66□□□□□ -0.06
BBS4Q96RK4 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms