Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SYNGAP1Q96PV0 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.45■□□□□ 0.38
SYNGAP1Q96PV0 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SYNGAP1Q96PV0 TPM3P8-201ENST00000330554 643 ntBASIC17.45■□□□□ 0.38
SYNGAP1Q96PV0 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SYNGAP1Q96PV0 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SYNGAP1Q96PV0 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.45■□□□□ 0.38
SYNGAP1Q96PV0 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SYNGAP1Q96PV0 AL645937.2-201ENST00000396808 931 ntBASIC17.45■□□□□ 0.38
SYNGAP1Q96PV0 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SYNGAP1Q96PV0 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.45■□□□□ 0.38
SYNGAP1Q96PV0 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.45■□□□□ 0.38
SYNGAP1Q96PV0 AC091804.1-201ENST00000486888 567 ntBASIC17.45■□□□□ 0.38
SYNGAP1Q96PV0 RNA5SP423-201ENST00000517127 109 ntBASIC17.45■□□□□ 0.38
SYNGAP1Q96PV0 RHOQP1-201ENST00000555758 579 ntBASIC17.45■□□□□ 0.38
SYNGAP1Q96PV0 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
SYNGAP1Q96PV0 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC17.45■□□□□ 0.38
SYNGAP1Q96PV0 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.45■□□□□ 0.38
SYNGAP1Q96PV0 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.45■□□□□ 0.38
SYNGAP1Q96PV0 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.45■□□□□ 0.38
SYNGAP1Q96PV0 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SYNGAP1Q96PV0 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SYNGAP1Q96PV0 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SYNGAP1Q96PV0 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.45■□□□□ 0.38
SYNGAP1Q96PV0 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.45■□□□□ 0.38
SYNGAP1Q96PV0 AC244452.3-201ENST00000636814 210 ntBASIC17.45■□□□□ 0.38
SYNGAP1Q96PV0 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
SYNGAP1Q96PV0 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.45■□□□□ 0.38
SYNGAP1Q96PV0 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SYNGAP1Q96PV0 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 AL354989.2-201ENST00000435838 1540 ntBASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 CNN2P10-201ENST00000443067 918 ntBASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.44■□□□□ 0.38
SYNGAP1Q96PV0 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYNGAP1Q96PV0 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms