Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
GAFA1Q96PS6 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 AL035633.1-201ENST00000406139 838 ntBASIC12.79□□□□□ -0.36
GAFA1Q96PS6 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 RN7SL692P-201ENST00000464677 288 ntBASIC12.79□□□□□ -0.36
GAFA1Q96PS6 AP005018.1-201ENST00000525475 301 ntBASIC12.79□□□□□ -0.36
GAFA1Q96PS6 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 AC005252.2-201ENST00000624630 1141 ntBASIC12.79□□□□□ -0.36
GAFA1Q96PS6 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 AL033527.5-201ENST00000641382 801 ntBASIC12.79□□□□□ -0.36
GAFA1Q96PS6 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 AL158070.2-201ENST00000623713 1621 ntBASIC12.79□□□□□ -0.36
GAFA1Q96PS6 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GAFA1Q96PS6 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 AL359258.3-201ENST00000622910 2331 ntBASIC12.78□□□□□ -0.36
GAFA1Q96PS6 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 TCAF2P1-201ENST00000291129 2421 ntBASIC12.78□□□□□ -0.36
GAFA1Q96PS6 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 AC098614.1-201ENST00000368528 745 ntBASIC12.78□□□□□ -0.36
GAFA1Q96PS6 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 AL645937.2-201ENST00000396808 931 ntBASIC12.78□□□□□ -0.36
GAFA1Q96PS6 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 TAF8-206ENST00000472818 719 ntTSL 2 BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 ENPP7P5-201ENST00000541031 1031 ntBASIC12.78□□□□□ -0.36
GAFA1Q96PS6 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC12.78□□□□□ -0.36
GAFA1Q96PS6 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms