Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDCA5Q96FF9 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.73■□□□□ 0.43
CDCA5Q96FF9 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC17.73■□□□□ 0.43
CDCA5Q96FF9 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.73■□□□□ 0.43
CDCA5Q96FF9 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC17.73■□□□□ 0.43
CDCA5Q96FF9 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC17.73■□□□□ 0.43
CDCA5Q96FF9 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC17.73■□□□□ 0.43
CDCA5Q96FF9 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC17.73■□□□□ 0.43
CDCA5Q96FF9 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CDCA5Q96FF9 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC17.73■□□□□ 0.43
CDCA5Q96FF9 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC17.73■□□□□ 0.43
CDCA5Q96FF9 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDCA5Q96FF9 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.73■□□□□ 0.43
CDCA5Q96FF9 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.73■□□□□ 0.43
CDCA5Q96FF9 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDCA5Q96FF9 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CDCA5Q96FF9 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDCA5Q96FF9 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CDCA5Q96FF9 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDCA5Q96FF9 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDCA5Q96FF9 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDCA5Q96FF9 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.72■□□□□ 0.43
CDCA5Q96FF9 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDCA5Q96FF9 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDCA5Q96FF9 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDCA5Q96FF9 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CDCA5Q96FF9 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.72■□□□□ 0.43
CDCA5Q96FF9 AC092364.2-201ENST00000596710 2692 ntBASIC17.72■□□□□ 0.43
CDCA5Q96FF9 MST1L-201ENST00000442552 2185 ntBASIC17.72■□□□□ 0.43
CDCA5Q96FF9 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDCA5Q96FF9 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.72■□□□□ 0.43
CDCA5Q96FF9 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDCA5Q96FF9 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDCA5Q96FF9 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDCA5Q96FF9 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDCA5Q96FF9 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CDCA5Q96FF9 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDCA5Q96FF9 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CDCA5Q96FF9 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CDCA5Q96FF9 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDCA5Q96FF9 AC078875.1-201ENST00000431907 724 ntBASIC17.72■□□□□ 0.43
CDCA5Q96FF9 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.72■□□□□ 0.43
CDCA5Q96FF9 MIR3677-201ENST00000578964 60 ntBASIC17.72■□□□□ 0.43
CDCA5Q96FF9 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.72■□□□□ 0.43
CDCA5Q96FF9 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC17.72■□□□□ 0.43
CDCA5Q96FF9 MEG3_2.1-201ENST00000611456 105 ntBASIC17.72■□□□□ 0.43
CDCA5Q96FF9 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
CDCA5Q96FF9 Z98259.2-201ENST00000641583 609 ntBASIC17.72■□□□□ 0.43
CDCA5Q96FF9 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDCA5Q96FF9 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.72■□□□□ 0.43
CDCA5Q96FF9 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CDCA5Q96FF9 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDCA5Q96FF9 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDCA5Q96FF9 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDCA5Q96FF9 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.72■□□□□ 0.43
CDCA5Q96FF9 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
CDCA5Q96FF9 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.72■□□□□ 0.43
CDCA5Q96FF9 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDCA5Q96FF9 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC17.72■□□□□ 0.43
CDCA5Q96FF9 AL360270.3-201ENST00000609118 1348 ntBASIC17.72■□□□□ 0.43
CDCA5Q96FF9 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
CDCA5Q96FF9 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.72■□□□□ 0.43
CDCA5Q96FF9 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDCA5Q96FF9 AC136759.1-202ENST00000530858 2194 ntBASIC17.72■□□□□ 0.43
CDCA5Q96FF9 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDCA5Q96FF9 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.71■□□□□ 0.43
CDCA5Q96FF9 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDCA5Q96FF9 AC079328.2-201ENST00000561241 3354 ntBASIC17.71■□□□□ 0.43
CDCA5Q96FF9 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDCA5Q96FF9 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDCA5Q96FF9 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.71■□□□□ 0.43
CDCA5Q96FF9 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CDCA5Q96FF9 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDCA5Q96FF9 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDCA5Q96FF9 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDCA5Q96FF9 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDCA5Q96FF9 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CDCA5Q96FF9 AL512430.1-201ENST00000392575 860 ntBASIC17.71■□□□□ 0.43
CDCA5Q96FF9 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC17.71■□□□□ 0.43
CDCA5Q96FF9 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDCA5Q96FF9 IGHV3-37-201ENST00000518544 340 ntBASIC17.71■□□□□ 0.43
CDCA5Q96FF9 CCNC-217ENST00000523985 958 ntTSL 2 BASIC17.71■□□□□ 0.43
CDCA5Q96FF9 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.71■□□□□ 0.43
CDCA5Q96FF9 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC17.71■□□□□ 0.43
CDCA5Q96FF9 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CDCA5Q96FF9 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC17.71■□□□□ 0.43
CDCA5Q96FF9 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDCA5Q96FF9 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
CDCA5Q96FF9 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC17.71■□□□□ 0.43
CDCA5Q96FF9 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDCA5Q96FF9 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.71■□□□□ 0.43
CDCA5Q96FF9 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDCA5Q96FF9 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDCA5Q96FF9 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC17.71■□□□□ 0.43
CDCA5Q96FF9 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDCA5Q96FF9 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDCA5Q96FF9 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDCA5Q96FF9 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.71■□□□□ 0.42
CDCA5Q96FF9 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CDCA5Q96FF9 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms