Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DDX1Q92499 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DDX1Q92499 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
DDX1Q92499 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.38■□□□□ 0.21
DDX1Q92499 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.38■□□□□ 0.21
DDX1Q92499 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DDX1Q92499 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DDX1Q92499 SPDYE19P-201ENST00000338590 713 ntBASIC16.38■□□□□ 0.21
DDX1Q92499 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
DDX1Q92499 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.38■□□□□ 0.21
DDX1Q92499 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.38■□□□□ 0.21
DDX1Q92499 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
DDX1Q92499 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DDX1Q92499 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.38■□□□□ 0.21
DDX1Q92499 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.38■□□□□ 0.21
DDX1Q92499 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.38■□□□□ 0.21
DDX1Q92499 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
DDX1Q92499 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.38■□□□□ 0.21
DDX1Q92499 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.38■□□□□ 0.21
DDX1Q92499 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DDX1Q92499 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.38■□□□□ 0.21
DDX1Q92499 FAM86LP-201ENST00000478302 853 ntBASIC16.38■□□□□ 0.21
DDX1Q92499 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DDX1Q92499 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.38■□□□□ 0.21
DDX1Q92499 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
DDX1Q92499 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
DDX1Q92499 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.38■□□□□ 0.21
DDX1Q92499 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.38■□□□□ 0.21
DDX1Q92499 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.38■□□□□ 0.21
DDX1Q92499 SAMD11P1-201ENST00000571429 661 ntBASIC16.38■□□□□ 0.21
DDX1Q92499 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.38■□□□□ 0.21
DDX1Q92499 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.38■□□□□ 0.21
DDX1Q92499 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.38■□□□□ 0.21
DDX1Q92499 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.38■□□□□ 0.21
DDX1Q92499 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.38■□□□□ 0.21
DDX1Q92499 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DDX1Q92499 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DDX1Q92499 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DDX1Q92499 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
DDX1Q92499 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.38■□□□□ 0.21
DDX1Q92499 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.38■□□□□ 0.21
DDX1Q92499 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
DDX1Q92499 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DDX1Q92499 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
DDX1Q92499 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.38■□□□□ 0.21
DDX1Q92499 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
DDX1Q92499 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DDX1Q92499 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
DDX1Q92499 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DDX1Q92499 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DDX1Q92499 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DDX1Q92499 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DDX1Q92499 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DDX1Q92499 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
DDX1Q92499 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.37■□□□□ 0.21
DDX1Q92499 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
DDX1Q92499 DGCR5-201ENST00000399539 862 ntBASIC16.37■□□□□ 0.21
DDX1Q92499 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.37■□□□□ 0.21
DDX1Q92499 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.37■□□□□ 0.21
DDX1Q92499 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.37■□□□□ 0.21
DDX1Q92499 AC026410.3-201ENST00000514280 936 ntBASIC16.37■□□□□ 0.21
DDX1Q92499 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.37■□□□□ 0.21
DDX1Q92499 TPRX2P-201ENST00000535362 881 ntBASIC16.37■□□□□ 0.21
DDX1Q92499 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.37■□□□□ 0.21
DDX1Q92499 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.37■□□□□ 0.21
DDX1Q92499 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.37■□□□□ 0.21
DDX1Q92499 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.37■□□□□ 0.21
DDX1Q92499 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
DDX1Q92499 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DDX1Q92499 TSPY26P-202ENST00000565928 3884 ntBASIC16.37■□□□□ 0.21
DDX1Q92499 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
DDX1Q92499 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DDX1Q92499 AC099063.4-201ENST00000641099 1602 ntBASIC16.37■□□□□ 0.21
DDX1Q92499 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DDX1Q92499 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DDX1Q92499 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
DDX1Q92499 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DDX1Q92499 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DDX1Q92499 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.37■□□□□ 0.21
DDX1Q92499 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.37■□□□□ 0.21
DDX1Q92499 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DDX1Q92499 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
DDX1Q92499 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.37■□□□□ 0.21
DDX1Q92499 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
DDX1Q92499 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
DDX1Q92499 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
DDX1Q92499 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.36■□□□□ 0.21
DDX1Q92499 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
DDX1Q92499 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
DDX1Q92499 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
DDX1Q92499 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.36■□□□□ 0.21
DDX1Q92499 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
DDX1Q92499 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.36■□□□□ 0.21
DDX1Q92499 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.36■□□□□ 0.21
DDX1Q92499 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
DDX1Q92499 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
DDX1Q92499 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.36■□□□□ 0.21
DDX1Q92499 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.36■□□□□ 0.21
DDX1Q92499 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
DDX1Q92499 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms