Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC18.08■□□□□ 0.49
STAG1Q8WVM7 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
STAG1Q8WVM7 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
STAG1Q8WVM7 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
STAG1Q8WVM7 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
STAG1Q8WVM7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
STAG1Q8WVM7 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
STAG1Q8WVM7 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
STAG1Q8WVM7 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.08■□□□□ 0.49
STAG1Q8WVM7 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
STAG1Q8WVM7 AC018665.1-201ENST00000622927 1362 ntBASIC18.08■□□□□ 0.49
STAG1Q8WVM7 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC18.08■□□□□ 0.49
STAG1Q8WVM7 KRT8P35-201ENST00000483942 1338 ntBASIC18.08■□□□□ 0.49
STAG1Q8WVM7 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
STAG1Q8WVM7 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
STAG1Q8WVM7 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
STAG1Q8WVM7 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.08■□□□□ 0.48
STAG1Q8WVM7 LSM5-207ENST00000410044 687 ntTSL 3 BASIC18.08■□□□□ 0.48
STAG1Q8WVM7 AC007274.1-201ENST00000439805 662 ntBASIC18.08■□□□□ 0.48
STAG1Q8WVM7 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
STAG1Q8WVM7 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.08■□□□□ 0.48
STAG1Q8WVM7 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.08■□□□□ 0.48
STAG1Q8WVM7 AC106760.1-201ENST00000508690 800 ntBASIC18.08■□□□□ 0.48
STAG1Q8WVM7 KRT18P25-201ENST00000508931 1278 ntBASIC18.08■□□□□ 0.48
STAG1Q8WVM7 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.08■□□□□ 0.48
STAG1Q8WVM7 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
STAG1Q8WVM7 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
STAG1Q8WVM7 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.08■□□□□ 0.48
STAG1Q8WVM7 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.08■□□□□ 0.48
STAG1Q8WVM7 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC18.08■□□□□ 0.48
STAG1Q8WVM7 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
STAG1Q8WVM7 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
STAG1Q8WVM7 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
STAG1Q8WVM7 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.08■□□□□ 0.48
STAG1Q8WVM7 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
STAG1Q8WVM7 AL157414.3-201ENST00000624276 1954 ntBASIC18.08■□□□□ 0.48
STAG1Q8WVM7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
STAG1Q8WVM7 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.08■□□□□ 0.48
STAG1Q8WVM7 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.08■□□□□ 0.48
STAG1Q8WVM7 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 AC023157.3-201ENST00000619086 2088 ntBASIC18.07■□□□□ 0.48
STAG1Q8WVM7 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 AC092933.1-201ENST00000393644 945 ntBASIC18.07■□□□□ 0.48
STAG1Q8WVM7 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 BOLA2P3-201ENST00000404566 256 ntBASIC18.07■□□□□ 0.48
STAG1Q8WVM7 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 KRT43P-201ENST00000434019 910 ntBASIC18.07■□□□□ 0.48
STAG1Q8WVM7 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 AC091951.1-201ENST00000512854 2465 ntBASIC18.07■□□□□ 0.48
STAG1Q8WVM7 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
STAG1Q8WVM7 REXO1L5P-201ENST00000622260 2098 ntBASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms