Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 AF228730.6-201ENST00000641497 218 ntBASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 AC084121.3-201ENST00000641716 218 ntBASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF3IP1Q8TDR0 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 TREML5P-201ENST00000421694 576 ntBASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 METTL21AP1-201ENST00000438852 635 ntBASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 AC087499.5-201ENST00000452760 1342 ntBASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRAF3IP1Q8TDR0 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 MIR943-201ENST00000401286 94 ntBASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 RPL13P2-201ENST00000440687 659 ntBASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 KRT18P43-201ENST00000469825 1281 ntBASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 AC139530.3-201ENST00000620344 690 ntBASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 KRT18P28-201ENST00000453838 1332 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms