Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CHD5Q8TDI0 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CHD5Q8TDI0 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.41■□□□□ 0.06
CHD5Q8TDI0 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
CHD5Q8TDI0 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHD5Q8TDI0 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.41■□□□□ 0.06
CHD5Q8TDI0 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
CHD5Q8TDI0 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CHD5Q8TDI0 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 ENPP7P14-201ENST00000621765 1040 ntBASIC15.4■□□□□ 0.06
CHD5Q8TDI0 AC006453.4-201ENST00000636949 1252 ntBASIC15.4■□□□□ 0.06
CHD5Q8TDI0 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.4■□□□□ 0.06
CHD5Q8TDI0 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 AC003102.2-201ENST00000589195 1469 ntBASIC15.4■□□□□ 0.06
CHD5Q8TDI0 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 GK-202ENST00000378941 458 ntTSL 3 BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 AL033527.4-201ENST00000641026 673 ntBASIC15.4■□□□□ 0.06
CHD5Q8TDI0 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHD5Q8TDI0 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.39■□□□□ 0.05
CHD5Q8TDI0 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHD5Q8TDI0 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHD5Q8TDI0 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHD5Q8TDI0 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHD5Q8TDI0 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHD5Q8TDI0 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHD5Q8TDI0 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHD5Q8TDI0 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHD5Q8TDI0 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHD5Q8TDI0 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CHD5Q8TDI0 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHD5Q8TDI0 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHD5Q8TDI0 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CHD5Q8TDI0 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHD5Q8TDI0 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.39■□□□□ 0.05
CHD5Q8TDI0 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.39■□□□□ 0.05
CHD5Q8TDI0 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.39■□□□□ 0.05
CHD5Q8TDI0 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.39■□□□□ 0.05
CHD5Q8TDI0 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.39■□□□□ 0.05
CHD5Q8TDI0 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHD5Q8TDI0 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
CHD5Q8TDI0 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHD5Q8TDI0 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHD5Q8TDI0 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHD5Q8TDI0 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHD5Q8TDI0 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHD5Q8TDI0 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.39■□□□□ 0.05
CHD5Q8TDI0 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.39■□□□□ 0.05
CHD5Q8TDI0 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHD5Q8TDI0 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.39■□□□□ 0.05
CHD5Q8TDI0 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHD5Q8TDI0 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CHD5Q8TDI0 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHD5Q8TDI0 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHD5Q8TDI0 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CHD5Q8TDI0 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.38■□□□□ 0.05
CHD5Q8TDI0 AC026954.1-201ENST00000429771 1293 ntBASIC15.38■□□□□ 0.05
CHD5Q8TDI0 C2orf27AP3-201ENST00000434123 579 ntBASIC15.38■□□□□ 0.05
CHD5Q8TDI0 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
CHD5Q8TDI0 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.38■□□□□ 0.05
CHD5Q8TDI0 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
CHD5Q8TDI0 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.38■□□□□ 0.05
CHD5Q8TDI0 AL354718.3-201ENST00000616414 581 ntBASIC15.38■□□□□ 0.05
CHD5Q8TDI0 MIR6752-201ENST00000618442 71 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms