Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBA3Q8TBC4 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBA3Q8TBC4 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBA3Q8TBC4 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.31■□□□□ 0.2
UBA3Q8TBC4 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.31■□□□□ 0.2
UBA3Q8TBC4 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBA3Q8TBC4 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBA3Q8TBC4 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBA3Q8TBC4 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.31■□□□□ 0.2
UBA3Q8TBC4 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
UBA3Q8TBC4 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBA3Q8TBC4 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBA3Q8TBC4 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBA3Q8TBC4 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBA3Q8TBC4 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBA3Q8TBC4 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBA3Q8TBC4 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBA3Q8TBC4 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
UBA3Q8TBC4 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
UBA3Q8TBC4 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
UBA3Q8TBC4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBA3Q8TBC4 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBA3Q8TBC4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.3■□□□□ 0.2
UBA3Q8TBC4 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.3■□□□□ 0.2
UBA3Q8TBC4 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBA3Q8TBC4 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBA3Q8TBC4 KRT8P22-201ENST00000562317 1415 ntBASIC16.3■□□□□ 0.2
UBA3Q8TBC4 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.3■□□□□ 0.2
UBA3Q8TBC4 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBA3Q8TBC4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.3■□□□□ 0.2
UBA3Q8TBC4 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
UBA3Q8TBC4 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
UBA3Q8TBC4 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBA3Q8TBC4 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
UBA3Q8TBC4 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBA3Q8TBC4 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
UBA3Q8TBC4 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.3■□□□□ 0.2
UBA3Q8TBC4 AP001582.1-201ENST00000525856 295 ntBASIC16.3■□□□□ 0.2
UBA3Q8TBC4 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UBA3Q8TBC4 AL596325.1-201ENST00000563991 1082 ntBASIC16.3■□□□□ 0.2
UBA3Q8TBC4 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.3■□□□□ 0.2
UBA3Q8TBC4 AC093813.1-201ENST00000605066 256 ntBASIC16.3■□□□□ 0.2
UBA3Q8TBC4 AL033527.5-201ENST00000641382 801 ntBASIC16.3■□□□□ 0.2
UBA3Q8TBC4 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBA3Q8TBC4 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBA3Q8TBC4 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
UBA3Q8TBC4 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
UBA3Q8TBC4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.3■□□□□ 0.2
UBA3Q8TBC4 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.3■□□□□ 0.2
UBA3Q8TBC4 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBA3Q8TBC4 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBA3Q8TBC4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBA3Q8TBC4 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBA3Q8TBC4 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UBA3Q8TBC4 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.29■□□□□ 0.2
UBA3Q8TBC4 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.29■□□□□ 0.2
UBA3Q8TBC4 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 AP006294.1-201ENST00000415407 339 ntBASIC16.29■□□□□ 0.2
UBA3Q8TBC4 SOCS2P1-201ENST00000417727 557 ntBASIC16.29■□□□□ 0.2
UBA3Q8TBC4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 AC004066.1-201ENST00000502488 802 ntBASIC16.29■□□□□ 0.2
UBA3Q8TBC4 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 SAMD11P1-201ENST00000571429 661 ntBASIC16.29■□□□□ 0.2
UBA3Q8TBC4 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 CU634019.7-201ENST00000624153 1185 ntBASIC16.29■□□□□ 0.2
UBA3Q8TBC4 FP236241.2-201ENST00000624906 1185 ntBASIC16.29■□□□□ 0.2
UBA3Q8TBC4 AL645728.2-202ENST00000641679 227 ntBASIC16.29■□□□□ 0.2
UBA3Q8TBC4 AC105233.6-201ENST00000642093 218 ntBASIC16.29■□□□□ 0.2
UBA3Q8TBC4 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.29■□□□□ 0.2
UBA3Q8TBC4 AC007787.1-201ENST00000588095 1583 ntBASIC16.29■□□□□ 0.2
UBA3Q8TBC4 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms