Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.17■□□□□ 0.18
SHKBP1Q8TBC3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 KRT8P44-201ENST00000441609 1350 ntBASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 AL138709.1-201ENST00000614840 1693 ntBASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 AC078819.1-201ENST00000547454 765 ntBASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 AC012085.1-201ENST00000548270 765 ntBASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 DUX4L45-201ENST00000566406 1057 ntBASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 BX539320.1-201ENST00000623759 877 ntBASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 KRT8P35-201ENST00000483942 1338 ntBASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SHKBP1Q8TBC3 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 LINC02447-202ENST00000501888 2146 ntBASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 RN7SL560P-201ENST00000577943 264 ntBASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.15■□□□□ 0.18
SHKBP1Q8TBC3 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms