Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 AL607033.1-201ENST00000623900 1599 ntBASIC15.32■□□□□ 0.04
RFWD2Q8NHY2 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFWD2Q8NHY2 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
RFWD2Q8NHY2 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFWD2Q8NHY2 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFWD2Q8NHY2 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 SLC25A1P1-201ENST00000528351 927 ntBASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 AC018845.2-201ENST00000568326 409 ntBASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 ZNF259P1-201ENST00000407656 1365 ntBASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 ST20-AS1-201ENST00000560255 4223 ntBASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 AC084364.1-201ENST00000551967 1556 ntBASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFWD2Q8NHY2 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 RPL5P21-201ENST00000404620 815 ntBASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 MBLAC2-202ENST00000514906 1936 ntBASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 AC096734.2-201ENST00000562054 433 ntBASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 AC034105.1-201ENST00000563488 319 ntBASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 CYP4F24P-201ENST00000586049 1580 ntBASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 AC073389.1-201ENST00000595595 795 ntBASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 AC064836.3-201ENST00000607928 673 ntBASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.3■□□□□ 0.04
RFWD2Q8NHY2 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms