Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
C3orf56Q8N813 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
C3orf56Q8N813 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
C3orf56Q8N813 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC12.11□□□□□ -0.47
C3orf56Q8N813 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
C3orf56Q8N813 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
C3orf56Q8N813 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
C3orf56Q8N813 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
C3orf56Q8N813 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
C3orf56Q8N813 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC12.11□□□□□ -0.47
C3orf56Q8N813 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
C3orf56Q8N813 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
C3orf56Q8N813 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
C3orf56Q8N813 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
C3orf56Q8N813 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC12.11□□□□□ -0.47
C3orf56Q8N813 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
C3orf56Q8N813 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
C3orf56Q8N813 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
C3orf56Q8N813 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC12.11□□□□□ -0.47
C3orf56Q8N813 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
C3orf56Q8N813 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
C3orf56Q8N813 AC006480.2-201ENST00000609770 1337 ntBASIC12.11□□□□□ -0.47
C3orf56Q8N813 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
C3orf56Q8N813 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
C3orf56Q8N813 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
C3orf56Q8N813 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
C3orf56Q8N813 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC12.1□□□□□ -0.47
C3orf56Q8N813 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.1□□□□□ -0.47
C3orf56Q8N813 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
C3orf56Q8N813 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC12.1□□□□□ -0.47
C3orf56Q8N813 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
C3orf56Q8N813 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
C3orf56Q8N813 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
C3orf56Q8N813 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
C3orf56Q8N813 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
C3orf56Q8N813 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
C3orf56Q8N813 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
C3orf56Q8N813 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
C3orf56Q8N813 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
C3orf56Q8N813 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
C3orf56Q8N813 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
C3orf56Q8N813 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
C3orf56Q8N813 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
C3orf56Q8N813 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.1□□□□□ -0.47
C3orf56Q8N813 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
C3orf56Q8N813 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
C3orf56Q8N813 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
C3orf56Q8N813 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC12.1□□□□□ -0.47
C3orf56Q8N813 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
C3orf56Q8N813 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.1□□□□□ -0.47
C3orf56Q8N813 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
C3orf56Q8N813 NKAIN1P1-201ENST00000435754 582 ntBASIC12.1□□□□□ -0.47
C3orf56Q8N813 AC011742.3-201ENST00000439053 820 ntBASIC12.1□□□□□ -0.47
C3orf56Q8N813 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.1□□□□□ -0.47
C3orf56Q8N813 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC12.1□□□□□ -0.47
C3orf56Q8N813 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
C3orf56Q8N813 AC005740.2-201ENST00000511085 419 ntBASIC12.1□□□□□ -0.47
C3orf56Q8N813 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
C3orf56Q8N813 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC12.1□□□□□ -0.47
C3orf56Q8N813 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
C3orf56Q8N813 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.1□□□□□ -0.47
C3orf56Q8N813 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
C3orf56Q8N813 HLA-C-210ENST00000640219 976 ntBASIC12.1□□□□□ -0.47
C3orf56Q8N813 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
C3orf56Q8N813 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
C3orf56Q8N813 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC12.1□□□□□ -0.47
C3orf56Q8N813 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC12.1□□□□□ -0.47
C3orf56Q8N813 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
C3orf56Q8N813 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
C3orf56Q8N813 AMT-206ENST00000458307 1860 ntTSL 2 BASIC12.1□□□□□ -0.47
C3orf56Q8N813 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
C3orf56Q8N813 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC12.1□□□□□ -0.47
C3orf56Q8N813 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
C3orf56Q8N813 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
C3orf56Q8N813 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
C3orf56Q8N813 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC12.1□□□□□ -0.47
C3orf56Q8N813 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC12.1□□□□□ -0.47
C3orf56Q8N813 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
C3orf56Q8N813 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
C3orf56Q8N813 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
C3orf56Q8N813 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.09□□□□□ -0.47
C3orf56Q8N813 AL603756.1-201ENST00000606511 2163 ntBASIC12.09□□□□□ -0.47
C3orf56Q8N813 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
C3orf56Q8N813 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC12.09□□□□□ -0.47
C3orf56Q8N813 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC12.09□□□□□ -0.47
C3orf56Q8N813 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
C3orf56Q8N813 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
C3orf56Q8N813 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
C3orf56Q8N813 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
C3orf56Q8N813 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
C3orf56Q8N813 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
C3orf56Q8N813 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
C3orf56Q8N813 AL023775.1-201ENST00000454907 1746 ntBASIC12.09□□□□□ -0.47
C3orf56Q8N813 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
C3orf56Q8N813 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
C3orf56Q8N813 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
C3orf56Q8N813 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
C3orf56Q8N813 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC12.09□□□□□ -0.47
C3orf56Q8N813 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
C3orf56Q8N813 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms