Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 AC006486.2-201ENST00000624246 2199 ntBASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 AL139094.1-201ENST00000405549 1188 ntBASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 AC106760.1-201ENST00000508690 800 ntBASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 SLC25A47P1-201ENST00000531577 414 ntBASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 BTNL10-201ENST00000595971 695 ntBASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 AP000845.1-201ENST00000581677 2131 ntBASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 AC018665.1-201ENST00000622927 1362 ntBASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 AL157414.3-201ENST00000624276 1954 ntBASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 AC012508.2-201ENST00000567613 1472 ntBASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
C9orf40Q8IXQ3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 KRT8P35-201ENST00000483942 1338 ntBASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 HLA-K-203ENST00000430151 1046 ntBASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 AC114812.1-204ENST00000449669 728 ntBASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 KRT18P25-201ENST00000508931 1278 ntBASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 AC104640.1-201ENST00000562617 2109 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms