Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 BX640514.1-201ENST00000583223 1918 ntBASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 CYP4F24P-201ENST00000586049 1580 ntBASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 INTS4P1-203ENST00000641008 3683 ntBASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 RNA5SP410-201ENST00000516285 106 ntBASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 PGAM5P1-201ENST00000518923 814 ntBASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 AC084364.1-201ENST00000551967 1556 ntBASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 AC026979.3-201ENST00000607315 403 ntBASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.47■□□□□ 0.07
TRIM42Q8IWZ5 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM42Q8IWZ5 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.46■□□□□ 0.07
TRIM42Q8IWZ5 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
TRIM42Q8IWZ5 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.46■□□□□ 0.07
TRIM42Q8IWZ5 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM42Q8IWZ5 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM42Q8IWZ5 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.46■□□□□ 0.07
TRIM42Q8IWZ5 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM42Q8IWZ5 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM42Q8IWZ5 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM42Q8IWZ5 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.46■□□□□ 0.07
TRIM42Q8IWZ5 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.46■□□□□ 0.07
TRIM42Q8IWZ5 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
TRIM42Q8IWZ5 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
TRIM42Q8IWZ5 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TRIM42Q8IWZ5 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.46■□□□□ 0.07
TRIM42Q8IWZ5 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.46■□□□□ 0.07
TRIM42Q8IWZ5 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.46■□□□□ 0.07
TRIM42Q8IWZ5 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.46■□□□□ 0.07
TRIM42Q8IWZ5 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.46■□□□□ 0.07
TRIM42Q8IWZ5 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.46■□□□□ 0.07
TRIM42Q8IWZ5 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms