Protein–RNA interactions for Protein: Q86XW9

NME9, Thioredoxin domain-containing protein 6, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME9Q86XW9 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NME9Q86XW9 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
NME9Q86XW9 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
NME9Q86XW9 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC20.54■□□□□ 0.88
NME9Q86XW9 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NME9Q86XW9 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NME9Q86XW9 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NME9Q86XW9 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NME9Q86XW9 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC20.53■□□□□ 0.88
NME9Q86XW9 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC20.53■□□□□ 0.88
NME9Q86XW9 AP000593.2-201ENST00000542775 1433 ntBASIC20.53■□□□□ 0.88
NME9Q86XW9 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NME9Q86XW9 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NME9Q86XW9 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC20.53■□□□□ 0.88
NME9Q86XW9 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC20.53■□□□□ 0.88
NME9Q86XW9 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC20.53■□□□□ 0.88
NME9Q86XW9 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
NME9Q86XW9 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
NME9Q86XW9 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
NME9Q86XW9 RN7SKP175-201ENST00000408472 289 ntBASIC20.53■□□□□ 0.88
NME9Q86XW9 CYP46A4P-201ENST00000414953 267 ntBASIC20.53■□□□□ 0.88
NME9Q86XW9 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC20.53■□□□□ 0.88
NME9Q86XW9 EIF4HP1-201ENST00000453115 687 ntBASIC20.53■□□□□ 0.88
NME9Q86XW9 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC20.53■□□□□ 0.88
NME9Q86XW9 NDUFV2P1-201ENST00000596415 907 ntBASIC20.53■□□□□ 0.88
NME9Q86XW9 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
NME9Q86XW9 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC20.53■□□□□ 0.88
NME9Q86XW9 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NME9Q86XW9 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC20.53■□□□□ 0.88
NME9Q86XW9 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NME9Q86XW9 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NME9Q86XW9 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC20.53■□□□□ 0.88
NME9Q86XW9 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NME9Q86XW9 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
NME9Q86XW9 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
NME9Q86XW9 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NME9Q86XW9 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC20.53■□□□□ 0.88
NME9Q86XW9 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NME9Q86XW9 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NME9Q86XW9 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NME9Q86XW9 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NME9Q86XW9 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
NME9Q86XW9 AC020910.5-201ENST00000623668 1865 ntBASIC20.52■□□□□ 0.88
NME9Q86XW9 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC20.52■□□□□ 0.88
NME9Q86XW9 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NME9Q86XW9 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NME9Q86XW9 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NME9Q86XW9 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NME9Q86XW9 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC20.52■□□□□ 0.88
NME9Q86XW9 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NME9Q86XW9 KRTAP19-9P-201ENST00000421795 191 ntBASIC20.52■□□□□ 0.88
NME9Q86XW9 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC20.52■□□□□ 0.88
NME9Q86XW9 SPTLC1P5-201ENST00000450718 252 ntBASIC20.52■□□□□ 0.88
NME9Q86XW9 ATP6V0CP2-201ENST00000469409 207 ntBASIC20.52■□□□□ 0.88
NME9Q86XW9 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC20.52■□□□□ 0.88
NME9Q86XW9 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC20.52■□□□□ 0.88
NME9Q86XW9 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NME9Q86XW9 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
NME9Q86XW9 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NME9Q86XW9 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NME9Q86XW9 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC20.52■□□□□ 0.87
NME9Q86XW9 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
NME9Q86XW9 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.51■□□□□ 0.87
NME9Q86XW9 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC20.51■□□□□ 0.87
NME9Q86XW9 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NME9Q86XW9 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
NME9Q86XW9 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
NME9Q86XW9 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC20.51■□□□□ 0.87
NME9Q86XW9 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NME9Q86XW9 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NME9Q86XW9 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NME9Q86XW9 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
NME9Q86XW9 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NME9Q86XW9 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NME9Q86XW9 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC20.51■□□□□ 0.87
NME9Q86XW9 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC20.51■□□□□ 0.87
NME9Q86XW9 RNMTL1P1-201ENST00000454103 560 ntBASIC20.51■□□□□ 0.87
NME9Q86XW9 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC20.51■□□□□ 0.87
NME9Q86XW9 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NME9Q86XW9 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NME9Q86XW9 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC20.51■□□□□ 0.87
NME9Q86XW9 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC20.51■□□□□ 0.87
NME9Q86XW9 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NME9Q86XW9 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC20.51■□□□□ 0.87
NME9Q86XW9 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC20.51■□□□□ 0.87
NME9Q86XW9 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NME9Q86XW9 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NME9Q86XW9 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NME9Q86XW9 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
NME9Q86XW9 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC20.51■□□□□ 0.87
NME9Q86XW9 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC20.51■□□□□ 0.87
NME9Q86XW9 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC20.51■□□□□ 0.87
NME9Q86XW9 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
NME9Q86XW9 AC011840.2-201ENST00000563063 1520 ntBASIC20.51■□□□□ 0.87
NME9Q86XW9 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC20.51■□□□□ 0.87
NME9Q86XW9 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
NME9Q86XW9 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
NME9Q86XW9 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NME9Q86XW9 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
NME9Q86XW9 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms