Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AL662844.4-201ENST00000606367 2838 ntBASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 AC104784.1-201ENST00000473096 294 ntBASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 IGLV3-15-201ENST00000518356 244 ntBASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 AC009779.1-201ENST00000551138 283 ntBASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 AC242376.1-201ENST00000559033 726 ntBASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 RN7SL555P-201ENST00000584742 339 ntBASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CNKSR3Q6P9H4 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CNKSR3Q6P9H4 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CNKSR3Q6P9H4 AL157414.3-201ENST00000624276 1954 ntBASIC16.33■□□□□ 0.21
CNKSR3Q6P9H4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CNKSR3Q6P9H4 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.33■□□□□ 0.21
CNKSR3Q6P9H4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.33■□□□□ 0.21
CNKSR3Q6P9H4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.33■□□□□ 0.2
CNKSR3Q6P9H4 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.33■□□□□ 0.2
CNKSR3Q6P9H4 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNKSR3Q6P9H4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNKSR3Q6P9H4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CNKSR3Q6P9H4 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNKSR3Q6P9H4 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CNKSR3Q6P9H4 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CNKSR3Q6P9H4 AC026316.1-201ENST00000398900 414 ntBASIC16.33■□□□□ 0.2
CNKSR3Q6P9H4 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC16.33■□□□□ 0.2
CNKSR3Q6P9H4 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.33■□□□□ 0.2
CNKSR3Q6P9H4 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
CNKSR3Q6P9H4 HLA-J-204ENST00000495278 958 ntBASIC16.33■□□□□ 0.2
CNKSR3Q6P9H4 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC16.33■□□□□ 0.2
CNKSR3Q6P9H4 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC16.33■□□□□ 0.2
CNKSR3Q6P9H4 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CNKSR3Q6P9H4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
CNKSR3Q6P9H4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNKSR3Q6P9H4 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNKSR3Q6P9H4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CNKSR3Q6P9H4 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CNKSR3Q6P9H4 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.33■□□□□ 0.2
CNKSR3Q6P9H4 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNKSR3Q6P9H4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CNKSR3Q6P9H4 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNKSR3Q6P9H4 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNKSR3Q6P9H4 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CNKSR3Q6P9H4 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNKSR3Q6P9H4 AC009093.2-202ENST00000620513 2079 ntBASIC16.33■□□□□ 0.2
CNKSR3Q6P9H4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNKSR3Q6P9H4 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNKSR3Q6P9H4 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNKSR3Q6P9H4 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CNKSR3Q6P9H4 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CNKSR3Q6P9H4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CNKSR3Q6P9H4 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNKSR3Q6P9H4 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNKSR3Q6P9H4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNKSR3Q6P9H4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNKSR3Q6P9H4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNKSR3Q6P9H4 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNKSR3Q6P9H4 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNKSR3Q6P9H4 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CNKSR3Q6P9H4 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.32■□□□□ 0.2
CNKSR3Q6P9H4 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.32■□□□□ 0.2
CNKSR3Q6P9H4 AC012441.2-201ENST00000444843 739 ntBASIC16.32■□□□□ 0.2
CNKSR3Q6P9H4 NOC2LP1-201ENST00000450578 752 ntBASIC16.32■□□□□ 0.2
CNKSR3Q6P9H4 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC16.32■□□□□ 0.2
CNKSR3Q6P9H4 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.32■□□□□ 0.2
CNKSR3Q6P9H4 AC079328.2-201ENST00000561241 3354 ntBASIC16.32■□□□□ 0.2
CNKSR3Q6P9H4 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC16.32■□□□□ 0.2
CNKSR3Q6P9H4 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.32■□□□□ 0.2
CNKSR3Q6P9H4 MIR4750-201ENST00000584564 56 ntBASIC16.32■□□□□ 0.2
CNKSR3Q6P9H4 AC132192.2-201ENST00000596206 1147 ntBASIC16.32■□□□□ 0.2
CNKSR3Q6P9H4 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.32■□□□□ 0.2
CNKSR3Q6P9H4 AC073352.2-201ENST00000609385 439 ntBASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms