Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC22.67■■□□□ 1.22
CDC42BPAQ5VT25 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC22.67■■□□□ 1.22
CDC42BPAQ5VT25 AC013726.1-201ENST00000563747 2285 ntBASIC22.67■■□□□ 1.22
CDC42BPAQ5VT25 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDC42BPAQ5VT25 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDC42BPAQ5VT25 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC22.67■■□□□ 1.22
CDC42BPAQ5VT25 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDC42BPAQ5VT25 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
CDC42BPAQ5VT25 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDC42BPAQ5VT25 AL365203.3-201ENST00000609742 2057 ntBASIC22.66■■□□□ 1.22
CDC42BPAQ5VT25 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDC42BPAQ5VT25 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CDC42BPAQ5VT25 AC239868.1-201ENST00000369385 493 ntBASIC22.66■■□□□ 1.22
CDC42BPAQ5VT25 XBP1P1-201ENST00000436573 652 ntBASIC22.66■■□□□ 1.22
CDC42BPAQ5VT25 NAGK-204ENST00000443872 878 ntTSL 3 BASIC22.66■■□□□ 1.22
CDC42BPAQ5VT25 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC22.66■■□□□ 1.22
CDC42BPAQ5VT25 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC22.66■■□□□ 1.22
CDC42BPAQ5VT25 FOS-204ENST00000554617 796 ntTSL 2 BASIC22.66■■□□□ 1.22
CDC42BPAQ5VT25 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC22.66■■□□□ 1.22
CDC42BPAQ5VT25 AC135983.4-201ENST00000564116 1262 ntBASIC22.66■■□□□ 1.22
CDC42BPAQ5VT25 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC22.66■■□□□ 1.22
CDC42BPAQ5VT25 AC092299.1-201ENST00000632679 757 ntBASIC22.66■■□□□ 1.22
CDC42BPAQ5VT25 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDC42BPAQ5VT25 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CDC42BPAQ5VT25 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDC42BPAQ5VT25 AC015909.3-201ENST00000572855 1794 ntBASIC22.66■■□□□ 1.22
CDC42BPAQ5VT25 MROH4P-201ENST00000431302 1578 ntBASIC22.66■■□□□ 1.22
CDC42BPAQ5VT25 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CDC42BPAQ5VT25 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CDC42BPAQ5VT25 AC026691.1-201ENST00000602502 2017 ntBASIC22.66■■□□□ 1.22
CDC42BPAQ5VT25 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDC42BPAQ5VT25 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC22.66■■□□□ 1.22
CDC42BPAQ5VT25 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
CDC42BPAQ5VT25 AC144522.1-201ENST00000625111 1658 ntBASIC22.66■■□□□ 1.22
CDC42BPAQ5VT25 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
CDC42BPAQ5VT25 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDC42BPAQ5VT25 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDC42BPAQ5VT25 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC22.66■■□□□ 1.22
CDC42BPAQ5VT25 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDC42BPAQ5VT25 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDC42BPAQ5VT25 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC22.65■■□□□ 1.22
CDC42BPAQ5VT25 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CDC42BPAQ5VT25 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC22.65■■□□□ 1.22
CDC42BPAQ5VT25 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
CDC42BPAQ5VT25 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDC42BPAQ5VT25 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDC42BPAQ5VT25 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC22.65■■□□□ 1.22
CDC42BPAQ5VT25 AC023024.2-201ENST00000623561 1993 ntBASIC22.65■■□□□ 1.22
CDC42BPAQ5VT25 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
CDC42BPAQ5VT25 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC22.65■■□□□ 1.22
CDC42BPAQ5VT25 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC22.65■■□□□ 1.22
CDC42BPAQ5VT25 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDC42BPAQ5VT25 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CDC42BPAQ5VT25 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
CDC42BPAQ5VT25 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC22.65■■□□□ 1.22
CDC42BPAQ5VT25 PTPA-215ENST00000432124 567 ntTSL 4 BASIC22.65■■□□□ 1.22
CDC42BPAQ5VT25 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDC42BPAQ5VT25 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC22.65■■□□□ 1.22
CDC42BPAQ5VT25 AC087045.2-201ENST00000606279 1003 ntBASIC22.65■■□□□ 1.22
CDC42BPAQ5VT25 AC092171.5-201ENST00000608012 942 ntBASIC22.65■■□□□ 1.22
CDC42BPAQ5VT25 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDC42BPAQ5VT25 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
CDC42BPAQ5VT25 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDC42BPAQ5VT25 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CDC42BPAQ5VT25 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC22.65■■□□□ 1.22
CDC42BPAQ5VT25 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CDC42BPAQ5VT25 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC22.64■■□□□ 1.22
CDC42BPAQ5VT25 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC22.64■■□□□ 1.22
CDC42BPAQ5VT25 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.22
CDC42BPAQ5VT25 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC22.64■■□□□ 1.22
CDC42BPAQ5VT25 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CDC42BPAQ5VT25 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC22.64■■□□□ 1.21
CDC42BPAQ5VT25 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CDC42BPAQ5VT25 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CDC42BPAQ5VT25 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC22.64■■□□□ 1.21
CDC42BPAQ5VT25 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CDC42BPAQ5VT25 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC22.64■■□□□ 1.21
CDC42BPAQ5VT25 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC22.64■■□□□ 1.21
CDC42BPAQ5VT25 AL022334.2-201ENST00000610000 484 ntBASIC22.64■■□□□ 1.21
CDC42BPAQ5VT25 AC005618.3-201ENST00000624928 458 ntBASIC22.64■■□□□ 1.21
CDC42BPAQ5VT25 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC22.64■■□□□ 1.21
CDC42BPAQ5VT25 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC22.64■■□□□ 1.21
CDC42BPAQ5VT25 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CDC42BPAQ5VT25 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CDC42BPAQ5VT25 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CDC42BPAQ5VT25 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CDC42BPAQ5VT25 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CDC42BPAQ5VT25 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC22.63■■□□□ 1.21
CDC42BPAQ5VT25 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CDC42BPAQ5VT25 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CDC42BPAQ5VT25 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDC42BPAQ5VT25 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CDC42BPAQ5VT25 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC22.63■■□□□ 1.21
CDC42BPAQ5VT25 AP000358.1-201ENST00000456260 156 ntBASIC22.63■■□□□ 1.21
CDC42BPAQ5VT25 AC005632.3-201ENST00000605544 308 ntBASIC22.63■■□□□ 1.21
CDC42BPAQ5VT25 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDC42BPAQ5VT25 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CDC42BPAQ5VT25 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDC42BPAQ5VT25 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDC42BPAQ5VT25 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms