Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRK2Q5S007 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRK2Q5S007 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.11□□□□□ -0.31
LRRK2Q5S007 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.11□□□□□ -0.31
LRRK2Q5S007 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRK2Q5S007 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
LRRK2Q5S007 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC13.11□□□□□ -0.31
LRRK2Q5S007 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRK2Q5S007 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRK2Q5S007 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRK2Q5S007 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.11□□□□□ -0.31
LRRK2Q5S007 HLA-DMA-203ENST00000395305 777 ntBASIC13.11□□□□□ -0.31
LRRK2Q5S007 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.11□□□□□ -0.31
LRRK2Q5S007 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC13.11□□□□□ -0.31
LRRK2Q5S007 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LRRK2Q5S007 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.11□□□□□ -0.31
LRRK2Q5S007 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
LRRK2Q5S007 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC13.11□□□□□ -0.31
LRRK2Q5S007 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
LRRK2Q5S007 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
LRRK2Q5S007 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LRRK2Q5S007 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LRRK2Q5S007 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
LRRK2Q5S007 DPY19L2P5-201ENST00000456300 331 ntBASIC13.1□□□□□ -0.31
LRRK2Q5S007 RPS23-204ENST00000507980 836 ntTSL 2 BASIC13.1□□□□□ -0.31
LRRK2Q5S007 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC13.1□□□□□ -0.31
LRRK2Q5S007 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.1□□□□□ -0.31
LRRK2Q5S007 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC13.1□□□□□ -0.31
LRRK2Q5S007 AP005264.6-204ENST00000588436 719 ntBASIC13.1□□□□□ -0.31
LRRK2Q5S007 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.1□□□□□ -0.31
LRRK2Q5S007 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC13.1□□□□□ -0.31
LRRK2Q5S007 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC13.1□□□□□ -0.31
LRRK2Q5S007 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.1□□□□□ -0.31
LRRK2Q5S007 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
LRRK2Q5S007 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LRRK2Q5S007 LINC01165-201ENST00000445190 1623 ntBASIC13.1□□□□□ -0.31
LRRK2Q5S007 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC13.1□□□□□ -0.31
LRRK2Q5S007 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LRRK2Q5S007 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LRRK2Q5S007 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
LRRK2Q5S007 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LRRK2Q5S007 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LRRK2Q5S007 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LRRK2Q5S007 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
LRRK2Q5S007 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LRRK2Q5S007 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LRRK2Q5S007 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LRRK2Q5S007 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LRRK2Q5S007 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LRRK2Q5S007 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LRRK2Q5S007 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.1□□□□□ -0.31
LRRK2Q5S007 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LRRK2Q5S007 AC083801.1-201ENST00000491689 358 ntBASIC13.1□□□□□ -0.31
LRRK2Q5S007 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC13.1□□□□□ -0.31
LRRK2Q5S007 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC13.1□□□□□ -0.31
LRRK2Q5S007 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
LRRK2Q5S007 AC009884.2-201ENST00000603110 324 ntBASIC13.1□□□□□ -0.31
LRRK2Q5S007 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
LRRK2Q5S007 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
LRRK2Q5S007 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.1□□□□□ -0.31
LRRK2Q5S007 AL672207.1-201ENST00000328462 1570 ntBASIC13.1□□□□□ -0.31
LRRK2Q5S007 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.1□□□□□ -0.31
LRRK2Q5S007 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LRRK2Q5S007 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.1□□□□□ -0.31
LRRK2Q5S007 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LRRK2Q5S007 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LRRK2Q5S007 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LRRK2Q5S007 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LRRK2Q5S007 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LRRK2Q5S007 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC13.1□□□□□ -0.31
LRRK2Q5S007 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRRK2Q5S007 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.09□□□□□ -0.31
LRRK2Q5S007 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LRRK2Q5S007 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRRK2Q5S007 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LRRK2Q5S007 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRRK2Q5S007 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LRRK2Q5S007 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC13.09□□□□□ -0.31
LRRK2Q5S007 AC023906.1-201ENST00000486386 453 ntBASIC13.09□□□□□ -0.31
LRRK2Q5S007 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC13.09□□□□□ -0.31
LRRK2Q5S007 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LRRK2Q5S007 MBP-238ENST00000580402 915 ntTSL 5 BASIC13.09□□□□□ -0.31
LRRK2Q5S007 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC13.09□□□□□ -0.31
LRRK2Q5S007 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
LRRK2Q5S007 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
LRRK2Q5S007 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRRK2Q5S007 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
LRRK2Q5S007 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRRK2Q5S007 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LRRK2Q5S007 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
LRRK2Q5S007 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRRK2Q5S007 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRRK2Q5S007 REXO1L5P-201ENST00000622260 2098 ntBASIC13.09□□□□□ -0.31
LRRK2Q5S007 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.09□□□□□ -0.31
LRRK2Q5S007 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.09□□□□□ -0.31
LRRK2Q5S007 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LRRK2Q5S007 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LRRK2Q5S007 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC13.09□□□□□ -0.31
LRRK2Q5S007 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LRRK2Q5S007 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms