Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC18.86■□□□□ 0.61
ATP2B3Q16720 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC18.86■□□□□ 0.61
ATP2B3Q16720 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.86■□□□□ 0.61
ATP2B3Q16720 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ATP2B3Q16720 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
ATP2B3Q16720 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC18.86■□□□□ 0.61
ATP2B3Q16720 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18.86■□□□□ 0.61
ATP2B3Q16720 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
ATP2B3Q16720 KRT90P-201ENST00000549264 1064 ntBASIC18.86■□□□□ 0.61
ATP2B3Q16720 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
ATP2B3Q16720 SAMD11P1-201ENST00000571429 661 ntBASIC18.86■□□□□ 0.61
ATP2B3Q16720 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
ATP2B3Q16720 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
ATP2B3Q16720 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.86■□□□□ 0.61
ATP2B3Q16720 AC145423.3-201ENST00000615987 467 ntBASIC18.86■□□□□ 0.61
ATP2B3Q16720 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC18.86■□□□□ 0.61
ATP2B3Q16720 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
ATP2B3Q16720 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ATP2B3Q16720 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.86■□□□□ 0.61
ATP2B3Q16720 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP2B3Q16720 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP2B3Q16720 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ATP2B3Q16720 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
ATP2B3Q16720 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP2B3Q16720 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
ATP2B3Q16720 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.86■□□□□ 0.61
ATP2B3Q16720 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.86■□□□□ 0.61
ATP2B3Q16720 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP2B3Q16720 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP2B3Q16720 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP2B3Q16720 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.86■□□□□ 0.61
ATP2B3Q16720 AL158070.2-201ENST00000623713 1621 ntBASIC18.85■□□□□ 0.61
ATP2B3Q16720 AC099063.4-201ENST00000641099 1602 ntBASIC18.85■□□□□ 0.61
ATP2B3Q16720 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.85■□□□□ 0.61
ATP2B3Q16720 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP2B3Q16720 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP2B3Q16720 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP2B3Q16720 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP2B3Q16720 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP2B3Q16720 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.85■□□□□ 0.61
ATP2B3Q16720 GZMB-202ENST00000382540 816 ntTSL 5 BASIC18.85■□□□□ 0.61
ATP2B3Q16720 STX1A-203ENST00000395155 783 ntTSL 2 BASIC18.85■□□□□ 0.61
ATP2B3Q16720 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
ATP2B3Q16720 NUS1P3-201ENST00000423502 862 ntBASIC18.85■□□□□ 0.61
ATP2B3Q16720 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
ATP2B3Q16720 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
ATP2B3Q16720 BNIP3P42-201ENST00000454982 569 ntBASIC18.85■□□□□ 0.61
ATP2B3Q16720 MFF-223ENST00000524634 647 ntTSL 2 BASIC18.85■□□□□ 0.61
ATP2B3Q16720 AC025279.2-201ENST00000569730 653 ntBASIC18.85■□□□□ 0.61
ATP2B3Q16720 BNIP3P29-201ENST00000598302 571 ntBASIC18.85■□□□□ 0.61
ATP2B3Q16720 AC011447.5-201ENST00000616168 564 ntBASIC18.85■□□□□ 0.61
ATP2B3Q16720 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC18.85■□□□□ 0.61
ATP2B3Q16720 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP2B3Q16720 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP2B3Q16720 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ATP2B3Q16720 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ATP2B3Q16720 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP2B3Q16720 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
ATP2B3Q16720 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP2B3Q16720 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC18.85■□□□□ 0.61
ATP2B3Q16720 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP2B3Q16720 AC148477.4-201ENST00000613430 1793 ntBASIC18.85■□□□□ 0.61
ATP2B3Q16720 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP2B3Q16720 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
ATP2B3Q16720 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
ATP2B3Q16720 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP2B3Q16720 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP2B3Q16720 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.85■□□□□ 0.61
ATP2B3Q16720 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
ATP2B3Q16720 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
ATP2B3Q16720 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
ATP2B3Q16720 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP2B3Q16720 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP2B3Q16720 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2B3Q16720 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
ATP2B3Q16720 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2B3Q16720 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2B3Q16720 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.84■□□□□ 0.61
ATP2B3Q16720 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2B3Q16720 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2B3Q16720 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.84■□□□□ 0.61
ATP2B3Q16720 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.84■□□□□ 0.61
ATP2B3Q16720 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC18.84■□□□□ 0.61
ATP2B3Q16720 ACTBP8-201ENST00000403258 1108 ntBASIC18.84■□□□□ 0.61
ATP2B3Q16720 AC099336.1-201ENST00000417053 1171 ntBASIC18.84■□□□□ 0.61
ATP2B3Q16720 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2B3Q16720 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2B3Q16720 C2orf27AP3-201ENST00000434123 579 ntBASIC18.84■□□□□ 0.61
ATP2B3Q16720 AC114812.1-204ENST00000449669 728 ntBASIC18.84■□□□□ 0.61
ATP2B3Q16720 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC18.84■□□□□ 0.61
ATP2B3Q16720 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC18.84■□□□□ 0.61
ATP2B3Q16720 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC18.84■□□□□ 0.61
ATP2B3Q16720 AL354718.3-201ENST00000616414 581 ntBASIC18.84■□□□□ 0.61
ATP2B3Q16720 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.84■□□□□ 0.61
ATP2B3Q16720 CR382287.1-201ENST00000623954 586 ntBASIC18.84■□□□□ 0.61
ATP2B3Q16720 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC18.84■□□□□ 0.61
ATP2B3Q16720 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.84■□□□□ 0.61
ATP2B3Q16720 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2B3Q16720 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2B3Q16720 AL138709.1-201ENST00000614840 1693 ntBASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms